Acidovorax temperans: PQV96_14795
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Entry
PQV96_14795 CDS
T08827
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
atem
Acidovorax temperans
Pathway
atem03410
Base excision repair
atem03430
Mismatch repair
atem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQV96_14795 (recJ)
03430 Mismatch repair
PQV96_14795 (recJ)
03440 Homologous recombination
PQV96_14795 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_14795 (recJ)
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PQV96_14795 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQV96_14795 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PQV96_14795 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WCT23349
LinkDB
All DBs
Position
3152210..3153934
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AA seq
574 aa
AA seq
DB search
MKIVARNIPPRTAWALEQAGVHPLLARLYAARGVQSKDELDDGLARLLPPSGEKGMKGID
TAARLLADAMAKNQRLIIVADYDCDGATACAVGVRGLRLLGAQNVDYLVPDRVADGYGLT
ASIARRVKERGADVLITVDNGIASVEGVAEAKALGLQVLVTDHHLPGPALPAADAIVNPN
QPGCTFESKSMAGVGVMFYVLLALRAELRARGVFDAATQPKLDPLLTLVALGTVADVVKL
DANNRRLVAQGLKRIRAGQMPAGVAALFHAAGRKAAAATTFDFGFALGPRINAAGRLADM
TLGIECLLTDDAGRAAELAAMLDGINRERREIEGGMREQAMLMAESLFDESEEPPPAISV
FDPDFHEGVVGIVASRIKDKLHRPTFVFAASSAPGKEHELKGSGRSIPGFHLRDALDLVA
KRHPGVILKFGGHAMAAGCTVAEESFDVFEQAFAQVAQEWLDAATLTRKIETDGPLAPEY
CRADIVDTLHREVWGQGFLPPTFSEEVEVLSQRLVGEAKNHLSIKLIHQGNPVDAIWFGR
TEPLPARVLLAFRLDVNEWKGERKVQFLVEGAQL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtagcaagaaacattcccccccgcaccgcctgggcgctggagcaagcaggc
gtacaccccctgctggcgcgcctgtatgccgcacgcggcgtgcaaagcaaagacgagctg
gacgacggcctggcccgcctgctgccccccagcggtgaaaaaggcatgaaaggcattgac
accgccgcccgcctgctggccgacgccatggcgaaaaaccagcgcctcatcatcgtggcc
gattacgactgcgacggtgccaccgcctgcgccgtgggcgtgcgcggcctgcgcctgctg
ggcgcgcagaacgtggactacctggtgcccgaccgcgtggccgacggctacggcctcacc
gcctccatcgcccgccgcgtaaaggaacgcggtgccgacgtgctcatcaccgtggacaac
ggcattgccagcgtggaaggcgtggccgaggccaaggccctgggcctgcaagtgctcgtt
accgaccaccacctgcccggccccgcgctgcctgcggcagatgccatcgtcaaccccaac
cagcccggctgcacgttcgagagcaagtccatggccggggtgggcgtgatgttctacgtg
ctgctggcactgcgggccgagctgcgtgcacgcggcgtttttgatgccgccacccaaccg
aagcttgacccgctgctcaccctggtcgcactgggcaccgtggccgacgtcgtgaagctc
gacgccaacaaccgccgccttgtggcccagggcctcaagcgcatccgcgcaggccaaatg
cccgctggcgtggccgctctgttccacgcagcaggccgcaaggcggctgcggccaccacg
ttcgactttggctttgccctgggcccgcgcatcaacgccgcaggccgcctggccgacatg
acgctgggcatcgaatgcctgctgacggacgacgcaggccgcgctgccgaactggccgcc
atgctggacggcatcaaccgcgagcgccgcgagatcgaaggcggcatgcgcgagcaggcc
atgctgatggccgagagcctgtttgacgagagcgaggagcccccacccgccatcagcgtg
ttcgacccggactttcacgaaggcgtggtgggtatcgtggccagccgcatcaaggacaag
ctgcaccgccccacctttgtgtttgccgccagcagcgcgccgggcaaggagcacgaactc
aagggctcgggccgctccatccccggctttcacctgcgcgatgcgctggacctggtggcc
aaacgccaccccggcgtcatcctcaagttcggcgggcacgccatggcggcgggctgcacg
gtggcagaggaatcgttcgacgtgtttgagcaggcctttgcccaggtcgctcaggaatgg
ctggacgccgccaccctcacccgcaagatcgaaaccgacggccccctggcccccgaatac
tgccgcgccgacatcgtggacaccctgcaccgcgaagtgtggggccagggctttttgccg
cccaccttcagcgaagaggtggaggtgctgagccagcgcctggtgggcgaggccaagaac
cacctctccatcaagctcattcaccagggcaacccggtagacgccatctggtttggccgc
accgaacccctgcccgcccgggtgctgctggccttccgcctggatgtgaacgaatggaag
ggcgagcgcaaggtgcagtttctggtggaaggggcgcagctgtag
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