Acidovorax temperans: PQV96_15290
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Entry
PQV96_15290 CDS
T08827
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
atem
Acidovorax temperans
Pathway
atem03030
DNA replication
atem03410
Base excision repair
atem03420
Nucleotide excision repair
atem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQV96_15290 (polA)
03410 Base excision repair
PQV96_15290 (polA)
03420 Nucleotide excision repair
PQV96_15290 (polA)
03440 Homologous recombination
PQV96_15290 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atem03032
]
PQV96_15290 (polA)
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_15290 (polA)
Enzymes [BR:
atem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQV96_15290 (polA)
DNA replication proteins [BR:
atem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PQV96_15290 (polA)
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PQV96_15290 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQV96_15290 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
WHD_SSO1393
Motif
Other DBs
NCBI-ProteinID:
WCT23436
LinkDB
All DBs
Position
complement(3254792..3257590)
Genome browser
AA seq
932 aa
AA seq
DB search
MTDKKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSPATGAIRGMINMMQALRKEVTADYA
VCVFDASGPTFRDALYTEYKATRSPMPDDLRSQIEPIHQVVDLLGWKVVAVPGVEADDVI
ATLANMAAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPALMVD
YQALVGDTVDNVPGVAKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALADYIPGLPAFDDITLDAPDNEGLLPFYEKYGFKGLAAAIKGAAAP
AAAAPTVAMPGQSGDLFADHSASTVAEEAQHRTVVYDTILNWADFDQWMERLHKAPLTAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLARLKPWLEDPKH
HKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHNLTSLAERHTGRKGITYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEIASSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVIKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPEIKMIMQVHDELVFELPESEVDWL
KTHIPRLMAEVAALKVPLLAEVGVGANWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaaagaccttggtgctggtggatggctccagctacctctaccgcgccttc
catgccatgcccgacctgcgggccgtgccgggcgaccccacaagccctgccacaggcgcc
attcgcggcatgatcaacatgatgcaggccctgcgcaaagaggtgactgccgactacgcc
gtgtgcgtgttcgacgccagcggccccaccttccgcgatgcgctgtacaccgaatacaag
gccacccgctcgcccatgcctgacgacctgcgcagccagatcgagcccatccaccaggtg
gtggaccttctgggctggaaggtggtggccgtgcccggcgtggaggccgacgacgtgatt
gccaccctggcgaacatggccgctgcgcagggcatcgaggtcatcgtctccagcggcgac
aaagacttgagccagctggtcaacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgcgatgtggcgggcgtgacggccgagtttggcgtgccccccgcgctgatggtggac
taccaggccctggtgggcgacaccgtggacaacgtgcccggcgttgccaaggtgggcccc
aagacggccgccaagtggctggaagaatatggctcgctcgacaacctgattgccaacgcc
gacgccatcaagggcgtggcaggcaacaacctgcgcgaggccattgccagcggccaactg
gccttgagccgccagctcgtcaccatgaagaccgactgcgcgctggccgactacatcccc
ggcctgcccgcgtttgatgacatcacgctcgatgcgcccgacaacgagggcttgctgccg
ttctacgaaaaatacggcttcaagggcctggccgctgccatcaaaggtgcagccgccccc
gccgctgcagcccccaccgtcgccatgcccggccaaagcggtgacttgtttgcggatcac
tccgccagcaccgtggccgaagaagcccagcaccgcacggtggtgtacgacaccatcctc
aactgggccgactttgaccagtggatggagcgcctgcacaaagccccgctcacggcgatc
gacaccgagaccgattcgctggacgagatgcgcgcccaaatcgtcggcatcagcttcagt
gtgcagcccggcgaagccgcctacatccccctgcgccacgaaggccccgacgcgcccgcg
caactgccgctggatgaagtgctggcccgcctcaagccctggctggaggaccccaagcac
cacaagctgggccagcacatcaaatacgaccgccacgtgttcgccaaccacggcatcgaa
gtgcagggctacgcgcacgacaccatgctgcaaagctatgtgctcgaagtgcacaagccc
cacaacctgaccagcctggccgagcgccacaccggccgcaaaggcatcacttacgaagac
ctgtgcggcaaaggcgcgcaccagatcccgttcgcgcaggtgcctgtggataaggccgcc
gcctactcgtgcgaagactccgaccagaccctggacgtgcacaacgccctgtggcccctg
ctgcaggcggacgacaaactgcgcttcatctacgagctggagattgccagcagtgaggcc
ctgtaccgcatcgaacgcaatggcgtgctgattgacgcacccacgctggccgcccaaagc
catgaactgggccagcgcatcctgcagctggaaaccgaggcgtatgagattgcaggccag
cccttcaacctgagcagccccaagcagttgggcgaaatcttcttcgacaagctgggcatg
cccgtgatcaagaagaccgccaccggcgcccgcagcaccgacgaagaggtgctggaaaag
ctggccgaagactaccccttgcccgccaagctgctggagcaccgcagcctcgtcaagctc
aagggcacctacaccgacaagctcgcccagctggccctgccgcgcacaggccgcgtgcac
acgcactacgcgcaggccgtggccgtcacaggccgcttgtccagcaacgaccccaacctg
cagaacatccccatccgcacccccgaaggccgccgcgtgcgcgaggcctttgtggccccc
gcaggccgcgtgattgccagcgccgactactcccagatcgagctgcgcatcatggcccac
ctgagcggcgaccactcgctgctgcacgccttccacgccgggctggacgtgcaccgcgcc
accgctgccgaggtgtttggggtggaggtcgatcaggtcaccagcgaacagcgccgctac
gccaaggtcatcaacttcggcctcatctacggcatgagcagcttcggcctggccaaaaac
ttaggcatcgaaaccaaggccgccgccgcctacatcgacaaatacttccagcgctacccc
ggcgtgaagcagtacatggacgacaccaaggccgccgccaaatccatgggctatgtcgaa
accgtgtttggccgccgcctgtacctgcccgagatcaactcccccaacggcccccgccgc
gccggggccgaacgcgccgccatcaacgcgcccatgcagggcacggcggcagacctcatc
aagctggccatggttgcggtgcagaaagagctggacgcccacaagccagaaatcaagatg
atcatgcaggtgcacgacgaactggtgttcgaactgcccgagagcgaggtggactggctc
aagacccacatcccgcgcctgatggcggaagtggcggcgctgaaggtgccgttattggcg
gaagtgggggtgggggctaattgggataaggcgcattga
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