Acidovorax temperans: PQV96_17300
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Entry
PQV96_17300 CDS
T08827
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
atem
Acidovorax temperans
Pathway
atem00300
Lysine biosynthesis
atem00470
D-Amino acid metabolism
atem01100
Metabolic pathways
atem01110
Biosynthesis of secondary metabolites
atem01120
Microbial metabolism in diverse environments
atem01230
Biosynthesis of amino acids
Module
atem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQV96_17300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQV96_17300 (dapF)
Enzymes [BR:
atem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PQV96_17300 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WCT23815
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All DBs
Position
complement(3704499..3705389)
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AA seq
296 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETQGRLGLTPAHYRYLADRHFGVGADQILTVRRPTADAAAE
GIDFEYVIHNADGGEVEQCGNGSRCFARYVRDKGLTDKDTIRVQTLSGVIAPRLTPDGRV
TVDMGRPVLEPARVPFDTTGLQPVAQGSGQKWPLALDVPAQPATVLVVVVSMGNPHAVQL
VDDVDTAPVALWGPLVERHPRFPQRVNAGFMQVVGRNHVRLRVFERGTGETLACGTGACA
AVAAGIRLGLLDNEVHVDMRGGRLTIAWTGQDTDTLYMTGPATTVFEGQIDIPDHL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcgcttcaccaaaatgcagggcgctggcaacgactttgtcgtgctggacgaa
acccagggccgcctgggcctgacgcctgcgcactaccgctacctggctgaccgccacttt
ggcgtgggcgcggaccagatcctcaccgtgcgccgacccaccgcagatgctgccgctgaa
ggcatcgatttcgaatacgtgatccacaacgccgatggcggcgaggtggagcagtgcggc
aacggctcgcgctgctttgcccgctacgtgcgcgacaagggtctgacggacaaggacacc
atccgcgtgcaaacgctcagcggcgtcatcgccccccgcctcacgcccgatggccgagtc
accgtggacatgggccgccccgtgctggagcctgcccgcgtgccctttgacaccaccggc
ctgcagccggtggcgcaaggttcagggcaaaaatggccgctagcgcttgatgtgcctgcg
caaccagctacagttttggtagtggtggtgtccatgggcaacccccacgccgtgcagctg
gtggacgatgtggacaccgccccggtggccctttggggccccctggtggagcggcacccg
cgctttccgcagcgtgtgaatgcgggctttatgcaggtggtgggccgcaaccacgtgcgc
ctgcgcgtgttcgagcgcggcacgggcgaaacactggcctgcggcacgggcgcttgcgcg
gccgtggcggcaggcattcgcctggggctgctcgacaacgaagtgcatgtggacatgcgc
ggcggccgcctcaccatcgcctggaccggccaggacaccgacaccctttacatgaccggc
ccggccaccaccgtgttcgaaggccagatcgacatcccagaccacctatga
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