Acidovorax temperans: PQV96_17960
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Entry
PQV96_17960 CDS
T08827
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
atem
Acidovorax temperans
Pathway
atem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQV96_17960 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_17960 (ruvB)
Enzymes [BR:
atem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQV96_17960 (ruvB)
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQV96_17960 (ruvB)
RecFOR pathway proteins
PQV96_17960 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_14
AAA_22
AAA_3
Rad17
AAA_18
NTPase_1
RNA_helicase
DUF815
TsaE
AAA_33
AAA_17
ABC_tran
AAA_28
Sigma54_activ_2
NB-ARC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WCT23933
LinkDB
All DBs
Position
complement(3842983..3844041)
Genome browser
AA seq
352 aa
AA seq
DB search
MTIQTDDFTPAPAKRVISAAPVSPQEEALERALRPKLLQEYVGQAKAREQLEIFIGAARK
RGEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEKNDVL
FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNP
LRDRFGIVARLEFYTADELASIVQRSAGLLNAPMDEEGGFEIARRSRGTPRIANRLLRRV
RDYAEVKGDGRITKSIADKALAMLDVDPQGFDVMDRKLLEAVIHRFDGGPVGLDNIAASI
GEEAGTIEDVIEPYLIQQGYLQRTPRGRIATLAAFRHLGVAPPQAAGGLFSE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagaccgacgacttcactcccgcccccgccaagcgcgtgatctccgccgcc
cccgtctcgccgcaggaagaggcgctcgagcgggcgctgcgtcccaagctgctgcaggaa
tacgtcgggcaggccaaggcgcgggagcagctggagatcttcatcggtgcggcccgcaag
cggggcgaggcgctggaccatgtgctcttgttcggcccgcccgggctgggcaagactacg
ctcagccacatcattgcggccgagttgggggtgaacttgcggcagaccagcgggccggtg
ctggaaaagcccaaggacctggccgccctgctcaccaatttggaaaagaacgacgttctt
ttcattgatgagatccaccgcctctcgcccgtggtcgaggaaatcctctaccccgcgctg
gaggactaccagatcgacatcatgatcggtgagggcccggcggcgcgcagcatcaagctg
gacctgcagcccttcacgctggtgggcgccaccacgcgggcgggcatgctcaccaacccg
ctgcgcgaccgctttggcatcgtggcgcggctggagttttatacggccgacgagctggcc
agcatcgtccagcgcagtgcggggctgctcaatgcgcccatggacgaggagggcggtttt
gaaatcgcccgccgctcgcgcggcacaccgcgcattgccaaccggctgctgcgccgggtg
cgcgactatgccgaagtcaagggcgacggtcgcatcaccaaatccattgccgacaaggca
ctggctatgctggatgtggacccgcaagggtttgacgtgatggaccgcaagctgctcgaa
gccgtgatccaccgttttgacggcggcccagtggggctggacaacatcgcagccagcatt
ggggaagaggcaggcaccattgaggatgtgattgagccctacctcatccagcagggctac
ctgcagcgcacgccccgtggccgcatcgccacgctggcggcgttccgccacctgggggtg
gcgccaccgcaagcggccggtgggctgttttctgaatga
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