Acidovorax temperans: PQV96_18205
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Entry
PQV96_18205 CDS
T08827
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atem
Acidovorax temperans
Pathway
atem00061
Fatty acid biosynthesis
atem00071
Fatty acid degradation
atem01100
Metabolic pathways
atem01212
Fatty acid metabolism
atem02024
Quorum sensing
atem04146
Peroxisome
Module
atem_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PQV96_18205
00071 Fatty acid degradation
PQV96_18205
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PQV96_18205
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQV96_18205
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atem01004
]
PQV96_18205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atem04147
]
PQV96_18205
Enzymes [BR:
atem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PQV96_18205
Lipid biosynthesis proteins [BR:
atem01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PQV96_18205
Exosome [BR:
atem04147
]
Exosomal proteins
Exosomal proteins of breast milk
PQV96_18205
Exosomal proteins of breast cancer cells
PQV96_18205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
DUF2464
Motif
Other DBs
NCBI-ProteinID:
WCT23979
LinkDB
All DBs
Position
3896225..3898171
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AA seq
648 aa
AA seq
DB search
MKTTFPQLLLQHATQRPQSPALREKEYGIWQTHTWADLAQLVEKVAAGLQQAGLQRHEHM
VVIGANRPRLYATMLAAQSLGAIPVPLYQDAVAAECIFPLNNAEVRFCLVEDQEQVDKLL
EIREQCPQIARIIYDDPRGLRNYNEEGLDALDSLIETGSAFVAKNPGWFKAEVAKAQPDD
VAAMFFTSGTTGNPKGVVHTHSTLLDRATAGAEFDKLTSSEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESASTVTIDLKEVGPTYYFAPPRIFEGLLTSVMIRMEDAGTLKRKMFE
ACMRVAKRVGPALMDGEPVGTLDRIKYALGNVLVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNQARADTVGVPIRGVQIKVADNGEILVKSA
GLLKEYYKNPTATAEVLTADGWYHTSDAGFLDAHGHLKIIDRVKDVGRIMGGANDGAMFA
PKYVENKLKFFPYIKEVVALGDKREKVCVMVNIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYELIRECIEKVNADLAGDSMLAGSQVSRFLVLHKELDADDGELTRTNKVRRGFIAEKYG
VLVDALYAGRTEQYIETQVKFEDGRTGSVSATLKLMDTKTFPPVKSAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacgtttccccagctgctgttgcagcacgccacccagaggccccagagcccg
gcgctgcgcgaaaaagaatatggcatctggcaaacccacacctgggcagacctggcccag
ctggtggaaaaggtggcagccgggctgcaacaggccggattgcagcgccacgaacacatg
gtggtgatcggcgccaaccgcccccgcctgtacgccaccatgctggcagcccagtcgctg
ggcgcgattccggtgccgctgtaccaggatgccgtggccgccgaatgcatcttcccgctg
aacaatgccgaagtgcgcttttgcctggtggaagaccaggagcaggtggacaagctgctc
gaaatccgcgagcagtgcccgcagatcgcacgcatcatctacgacgacccccgtggcctg
cgcaactacaacgaagaaggcctggatgcgctggactcgctgatcgaaaccggcagcgcc
tttgtggccaagaaccccggctggttcaaagccgaggtggccaaggcccagccagacgat
gtggcggccatgttcttcacatccggcaccacgggcaaccccaaaggcgtggtgcacacc
cacagcacgctgctcgaccgcgccacggcaggcgccgagttcgacaagctcaccagcagc
gaagaagtgctggcctacctgcccccggcatggatcggccagaacatcttcagctacgcc
cagtggctggcctgcggctacgtggtcaattgccccgaatcggccagcaccgtgaccatc
gacctcaaggaagtgggccccacctactactttgcacccccccgcatttttgaaggtctg
ctgaccagcgtgatgatccgcatggaagacgctggcaccttgaagcgcaagatgttcgag
gcctgcatgcgtgtggccaaacgcgtgggccccgccctgatggacggcgagcccgtgggg
acgctggaccgcatcaagtacgcgctgggcaacgtgctggtgtacggcccgctgcgcaac
aacctcggcttcagccgcgtgcgggtggcctacacagcgggcgaggccattggccccgac
ctgttcactttctaccgctccatcggcatcaacctcaagcagctctacggttctaccgaa
accgccgtgttcgtgtgcctgcagcccgacaaccaggcccgcgccgacacggtgggcgtg
cccatccgcggggtgcagatcaaggtggccgacaacggcgagatcctggtcaagtcggca
gggttgctcaaggagtactacaagaatcccacagccaccgcagaagtgctcacggccgac
ggctggtaccacaccagcgatgccggttttctggatgcgcacggtcacctcaagatcatc
gaccgcgtcaaggacgtgggccgcatcatgggcggtgccaacgacggtgccatgtttgcg
cccaagtatgtggagaacaagctcaagttcttcccgtacataaaggaagtggtggccctg
ggcgacaagcgcgagaaagtgtgcgtgatggtcaacatcgacttcgacgccgtgggcaac
tgggccgagcgccgcaacctgccctacgccggctacaccgacctggcgcaaaagccagag
gtgtacgagctgatccgcgaatgcatcgagaaggtgaacgccgacctggcgggcgacagt
atgctggctggcagccaggtgagccgcttcctggtgctgcacaaggagctggacgccgac
gacggcgaactcacccgcaccaacaaggtccgccggggcttcatcgccgagaagtacggc
gtgctcgtcgatgcgctgtacgcaggccgcaccgagcagtacatcgagacccaggtcaag
ttcgaggacggccgcaccggcagcgtgagcgccacgctcaagctgatggacaccaagact
ttcccgcccgtcaagagcgccgcctga
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