Actinia tenebrosa (Australian red waratah sea anemone): 116288105
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Entry
116288105 CDS
T07455
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116288105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116288105
Enzymes [BR:
aten01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
116288105
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116288105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
116288105
NCBI-ProteinID:
XP_031550704
UniProt:
A0A6P8H2T4
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MEIVRSNFLESLPMISEVIESASFLAIDGEFSGLNTKWKLENTIDTPQERYSKLLNTSKD
FLIIQFGLCAFTLDSQKNCYNAKPFNFYIFPRHLTRDSPDVRFLCQSSSIDFLGGHNFDF
NKWIHEGISYLRPHDEEKLRNNLQERHEQSFGPFTSPAPVPSPAASTASSNKSSTSSSKT
PVIIPPEHQPFVEKACNEIEEMLKNPESKTTNLPPCNGYLLKLIYQSAKQRFTSGIQLEK
STNDKKECFIVVTKVNEDEKKKFEEEKQAKEKEMIENAVGFSTVLKMVSQSGKLIVGHNM
LLDLMHIVHQFSCPLPEDVDEFKAIIQALYPRIVDTKVMATTQPFRDQLPSTILGDLVKH
LTVAPFKKPVIELDKEFSRYQEGTEKLHEAAYDAYITGLAFISMANYLGSFQDPPKSMIS
PDSTLVSPFLNKIFLYRMEDIPYLNLAGEDLKPARDHVFFLTFPSTWRYGDILELFSPFG
FVYVSWINDASAFVSLALRGNKNKVLEKLSDDDAPYTITSYAEYFGYTCNANPGEDNEAE
AGNYHPGSKRRRSEGTLQSNKYKTTEMKIADTNSEPEEGEIIEEPVTKKKKKDQHFDVPK
DW
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtgcgttcaaacttccttgaatccctccctatgatctccgaggttattgag
tctgcatctttcttggctatcgatggagaattctctggtttaaatacaaaatggaagctt
gaaaatacgattgacaccccacaagaacgctactcaaaactcctaaatacttccaaggac
tttctcataattcagtttggtttgtgtgcctttactttggatagtcaaaagaactgttat
aatgccaaaccttttaacttctatatttttccgaggcatttaacgcgtgatagtccagat
gtgaggtttttgtgtcaaagttcaagcattgattttcttggagggcacaattttgacttc
aataagtggattcacgaaggaatatcgtatcttagacctcacgatgaggaaaaactgagg
aataatttacaagaacgacacgagcagagttttggtccttttacctctccagcaccagtt
ccatcaccagcagcctcgacagcttcatccaataagtctagtaccagttcttccaaaact
cctgtaatcattcctccagaacatcaaccatttgtcgagaaagcttgtaatgagatagaa
gaaatgcttaaaaatccagagagtaaaactaccaacttacccccctgtaatggttacttg
ctaaaactcatttaccaaagtgcaaagcagagattcacttcagggattcagttggagaag
agcaccaatgacaagaaggagtgctttatcgtagtcactaaagttaatgaagatgagaaa
aagaaatttgaggaagagaaacaagccaaggagaaagagatgattgaaaatgcagtgggg
ttctcaactgttttgaaaatggtctcccaatctggtaaactaatcgtcggtcacaatatg
ttgttggatctaatgcatattgtacaccaattcagttgcccacttcctgaagatgttgat
gagttcaaagcaataatccaagctctatacccaagaattgtggatacaaaagtaatggca
acaacgcaaccatttcgagatcaacttccttctacaatattaggtgacctagtaaaacat
ctcacagttgctccttttaagaaaccagtcatagagctggacaaggagttttcaaggtac
caggagggcacagaaaagctccatgaagcagcttacgatgcctatataactgggctggca
tttatttccatggctaactacctgggtagttttcaagatccaccaaagtcaatgatatca
cctgattcaacattggtatcaccattcctcaacaaaatcttcctctacagaatggaagat
ataccttacctgaatcttgctggtgaagacttgaagcctgcacgagatcatgtcttcttt
cttactttcccaagtacctggagatatggagatattcttgaactttttagtccatttgga
tttgtctatgtctcctggataaatgacgcgtcagcatttgtgtcgcttgccttgagaggt
aacaagaataaagtgctagagaaattaagtgatgacgatgcaccctatacaatcacatct
tatgctgagtactttggatacacctgtaatgctaaccctggggaagacaatgaagcagag
gctggcaattatcatccaggaagcaagagacgcagaagtgagggtactttgcagtccaac
aagtacaaaactacagagatgaagatagctgatacaaacagtgaacctgaagaaggggaa
attattgaagagccagttacgaagaaaaagaaaaaagaccaacactttgatgtaccaaaa
gattggtag
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