Actinia tenebrosa (Australian red waratah sea anemone): 116290727
Help
Entry
116290727 CDS
T07455
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116290727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116290727
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116290727
Spliceosome [BR:
aten03041
]
Complex C
Other components
Step II factors
116290727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
ResIII
AAA_22
ATPase
HA2_N
ABC_tran
AAA_30
Helicase_RecD
AAA_29
Motif
Other DBs
NCBI-GeneID:
116290727
NCBI-ProteinID:
XP_031553689
UniProt:
A0A6P8HB46
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSTNTTQTKTSSVTXRDYKYYTLSANQEGVNECQSSVRAMSSDPKSYGNVDTIVQSMNTN
AVQSMQSSMVTYRSLSQFRSDVSDHQVINTDLIQSPKLNSAVSKQVDDIITDTWSSNLPF
SMSTNGTTSPQDXTDNLPFSLQDGETALKVEDSVMDNSVPFNLQNGTSTRRGSMSAPNAL
PTSYLDDAVPDQVEKHGTENCLNNLPFSLQDDTLGHPVDEANIDIATICQASXKTDDISS
KVVTQGTQNNTCNGGTRXLQRKVHPPLNENECLVSITLPGAVDWQVALDGLQYTLSRFKF
KLQDLQNKSRKLHSKKYVVCFENKEEVPSAIDILKNGKINAVLCEVILDKSINDILKEKD
KALASHQKKFDEVMQSIDSLQGEKKRAGKTKMIALDKWEKRKAEKEALTQKALELNCQKK
EFADIVCKLIDRILSLKEVKVGWKELDSEIKEVKQLMEREKDRLNKALPIYAKRSVITDT
VKSNQVSIILGETGSGKSTQVVQYLYDSGLAEKGVIVCTQPRKVAAFSLEKYVCEEMKES
GHVVECSVGARAADKRAKKTKILFTTDYSLLMECIKDQDLTRFSCVIIDEAHERNMNTDL
LLGIIKKALPRRPDLRVIITSATINPDLFIKYFGDCPVVKVSGKTFPVDVIWNKEXKTSG
DYVLEAVEKVVEIHQNEEAGDVLVFLTCPAEIEQACTKVRNRIKKDDIXFLPLHGKLQQE
EQREVFKPTPKGKRKVVFSTNCAETSLTIPGIKFVVDTGKAKEMKYDPKRNINSLEVSDV
SQSSADQRKGRAGRIESGKCYRLYTEDDFNAMEKSSKPEILRVNLGQALLKLMELGIRNP
ADFDYVESPPVESIKTAMMELEELGATCGGQLTELGKKMAKVPVDPGLSKFLFEGFERGV
GXEALVLVSVATINGNVFFRMGTEEEKKAADMKKVEFCHLGGDFMTLLDVYRSWQKVDKR
DRGRWCFEKSXNAKAMRMADETVNDLKSTLKHELKMSDIKWSSLDKETTDGRLQKTLFSC
FMTKLCVYTGHERRGYKTITGGHFVKIHPSSSVNFTGSNPKFIVYEXILKTSQDFLLNVT
PIETSWLQESIAEKKLHLDIEEVLAEVLMVPLPSIRCSSILMKRAFEPFRSKLPCLEKNI
SDSCNSAPIVVEAKRNAGKVDLFVPKNYSDKAVELTQKILEEQRERIREETRECPVIAES
SALRVVMEKGLTVQQILLPDMYRSVVVRNLQDRPLHQRMLRNFFVNLGNLLTLTLTVTCT
LLLMKSLKKRH
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaacaccacacaaacgaaaacgtctagtgtgactsacagggactataaatat
tatactttgagtgcaaaccaagaaggcgtgaacgagtgtcagtccagtgtaagagcaatg
tccagtgatccaaaatcatacggaaatgtcgacacaatcgttcaatcaatgaacacaaac
gctgtacaaagtatgcagtctagtatggtcacttataggagtctgtcacaatttaggtca
gacgtatcagatcatcaagtaattaatacagacttgatacaaagtcctaagttgaattcg
gcagtctctaagcaagtggacgatatcattacagatacctggtccagtaatttaccattc
tctatgtctacgaatggaacaacatctcctcaagacmatacagataacttgccattctcc
ctgcaggatggtgaaacagctttaaaggtggaagactctgttatggataacagtgtacca
tttaatttacaaaatgggacatctacccgtagagggagtatgtctgctcccaatgcctta
ccaacctcttatttggatgacgctgtacccgatcaagtggaaaaacacggaacagagaac
tgtcttaataatctaccattttcgctacaggatgacacattaggccatcctgttgacgag
gccaatatagacattgctaccatctgtcaagcatcacytaaaacagatgacatttccagy
aaagtggtgacccaaggtacacagaacaatacttgtaatggaggaacgaggyctttgcaa
cgaaaggtacaccctccgctaaatgaaaatgaatgccttgtatccatcactttaccagga
gcagttgactggcaggtagccttagatggcttacaatacacgctaagtcgttttaaattc
aagctacaagaccttcaaaataagtctcgtaaactacatagtaaaaagtatgtggtctgc
tttgagaacaaagaagaagtaccctcggcaatcgacatcttgaaaaatggaaagatcaac
gccgttctctgcgaagttatcctcgacaaatccatcaacgacattttaaaagagaaagat
aaagccctggcatcacatcaaaagaaatttgacgaagttatgcaaagcattgacagtttg
caaggtgaaaaaaaaagggctggtaagactaagatgatcgctttggacaaatgggagaaa
cgaaaagccgaaaaagaagcgctgacacaaaaggcactagaattaaattgtcagaaaaaa
gagtttgcagatattgtttgtaaacttatcgacagaatcctttctctaaaggaagtgaaa
gttggctggaaggaattagattcagagataaaagaagtgaaacagctgatggaaagagag
aaagatcgcttaaataaagctcttccaatctacgctaagagaagtgttatcacagacacc
gtgaaaagcaaccaagtaagcattattttgggagaaactggttctggcaaaagcacacaa
gttgttcagtatctatacgattcagggctggcagagaaaggcgtaatcgtttgtacacag
ccaagraaagtcgctgccttcagcctggaaaagtatgtctgtgaagaaatgaaagaaagc
ggacatgtagtggaatgctctgtcggtgctcgagcagctgacaaaagagcaaagaagacc
aaaattctctttacaacagactactcgttgttaatggaatgcattaaagatcaagatctt
actcgattttcctgtgtcatcattgacgaagcccacgaaagaaacatgaacactgatctt
ctcctgggaattatcaaaaaagcacttcccaggcgaccggacttgcgtgtcattataacc
tcagcaaccataaatccagatctgtttatcaagtatttcggtgattgccctgtggttaaa
gtgtctggtaagacgttccctgtggacgttatttggaataaggagmaaaaaacttctggt
gattacgttttggaagctgtggagaaagtcgtggagatacatcagaacgaagaagccggt
gacgttctcgtcttccttacgtgtccagctgaaatcgaacaggcttgtactaaagttcgt
aacaggatcaaaaaagatgatattmaattccttcccttgcacggaaaacttcaacaagaa
gagcaaagagaggtwttcaagcccactccgaaaggaaaacgcaaagtcgttttttccact
aactgtgctgagacctccctgaccatccctggaatcaagttcgtagtggacacagggaaa
gcaaaagagatgaaatatgatccaaaaaggaacatcaactctcttgaagtatctgacgtt
agccaaagttctgccgatcaacgaaaaggaagagctgggaggatcgagagtgggaaatgc
taccgcctgtacactgaagatgatttcaatgccatggagaagtcatctaaaccagagatc
ctacgcgtkaatcttggtcaagcwttgytgaagcttatggaactgggcatacgaaaccct
gctgactttgattacgtcgagtctcctcctgtcgagtckatcaaaacagcgatgatggag
ctggaagaacttggggctacatgtggtggccaacttactgagcttggtaaaaagatggcc
aaagttcctgttgatcctggtctgtcaaagtttctgtttgaaggttttgaacgaggagtt
ggcwatgaagctcttgtgttggtgtctgtggccactataaatggcaatgtcttctttcga
atgggaactgaagaagagaagaaagcagcagatatgaagaaagttgagttttgtcacctt
ggaggcgatttcatgactcttctagacgtttatcgatcttggcagaaagtagacaagaga
gacagaggccggtggtgctttgaaaagagtwtgaatgccaaagcgatgcgtatggctgat
gaaactgttaatgatctcaaatcaacactgaaacacgagctcaagatgtctgacatcaaa
tggtccagtcttgacaaagaaacaacggatggtcggctgcagaaracactcttttcatgc
ttcatgacgaaactgtgcgtttacactggacacgaaagaagaggttacaagacaatcact
ggaggacattttgtgaagattcacccgtcttcctctgttaacttcactggctccaatcct
aagttcattgtctatgagaamattctcaagacttctcaagatttcttattgaacgttact
ccaattgagacaagctggcttcaggagagtatcgcagagaaaaaactacaccttgatatt
gaagaagtcttggctgaagttttgatggtgccactacccagcatacgctgcagttcgatt
ttgatgaaaagagcattcgagccttttagaagtaaattaccttgccttgagaaaaacatc
tcagattcctgtaatagcgcaccgattgtcgtcgaggcaaagagaaatgccggtaaagtg
gatttgtttgttcccaaaaattactctgacaaggctgtagaattaacccagaaaatattg
gaagagcaaagggaaagaattcgcgaggagacgcgtgaatgtcctgtaattgctgagtct
tctgctcttcgagtggttatggagaaaggtctaacagtgcagcaaattctactgccagac
atgtaccgctctgtggtggtgagaaacctccaagataggccattacaccagcggatgtta
aggaatttctttgtcaatttgggaaacttattgactttaactcttaccgtgacatgcact
ttgctacttatgaaaagcctgaagaagcgacactag
DBGET
integrated database retrieval system
