Actinia tenebrosa (Australian red waratah sea anemone): 116295454
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Entry
116295454 CDS
T07455
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten04512
ECM-receptor interaction
aten04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116295454
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116295454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aten00536
]
116295454
Glycosaminoglycan binding proteins [BR:
aten00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116295454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
116295454
NCBI-ProteinID:
XP_031559125
UniProt:
A0A6P8I2P7
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MDLTLLAFLAGLFYFTVDQTNCQDCSKPLDVGILLDASGSIGRRRWAKVVNFAQSMVNSF
KVSEGGSHVAILLYSTKTSIEVGFNTFTGAQRTASNINAKIAAINYRNWKGLTYIDRGLK
TANEELFTAEAGMRTSDDIKKILILFTDGKQTKDRDPYTELNVASQPMKDKGIEIYALGV
GKSSSINVNELQQIASKTENVYTAETFDELATLAIKISRASCGIPPPVPQAISYTSVIGP
PGLPGTVGEPGQLGAPGLRGPSGRPGSEGDKGEPGDSGPTGPNGPPGPPGPPGPPKVMTI
PGPKGPVVVPQINYGGAGELQRVGDPGPPGRPGSRGPDGIPGPPGARGTPGDRGPNGLQG
VMGPPGPPGRNGEDGDAGGPGRNGPPGDPGRKGPRGDRGKAGSEGKRGHQGRSGRTGTKG
DRGVDGEKGAVGDTGLNGIDGVDGERGMRGVPGPIGDPGPVGFQGGRGNAGLFGSQGNPG
QAGPAGPSGPRGPKGAPGRAGSTGPLGYAGETGTTGPIGPKGTTGANGQNGNQGEPGPKG
ASGDLGAAGEQGPTGEVGTRGMAGDPGNRGERGSRGDIGKNGAAGETGNKGGPGKPGVKG
ARGQPGPVGKRGAPGDSGQAGAPGSTGKRGMTGAQGFMGPTGAKGAKGGVGGDGKRGAEG
NKGDPGETGEPGGVGQTGEQGARGRVGVAGRDGGPGLPGKPGDDGREGENGSPGERGPSG
QTGLTGKKGARGQAGKNGVIGRSGPAGIKGQQGIIGERGLPGGPGGPGLAGALGETGPGG
DPGDPGPVGKNGKPGPSGLSGKDGAKGNSGANGQPGRRGLDGKTGDRGEGGDMGVPGRNG
ERGIEGRQGIRGVPGAPGTIGSDGPPGTSGSPGLPGQPGKNGAKGEQGDQGGEGPRGEDG
ENGKQGADGGDGGRGPIGPKGLAGERGDDGAAGGPGTTGDTGMRGDTGVMGKPGLQGLPG
SAGPAGAIGLVGPQGGKGVRGERGAMGSLGATGLIGDVGAAGPKGSIGSQGSSGEQGGPG
GRGQPGPPGPTGPGGNAGIPGPPGQPGSKGPPGDSGAQGESGEDGARGVAGKVGPLGSNG
GVGAKGPSGSIGLPGDSGSGGPRGAVGLPGQPGLEGPRGFKGESGEAAANGKPGLPGPAG
SIGAIGKPGAPGIAGADGPTGTSGAAGASGRPGRKGIAGDTGRQGRQGEQGGKGAAGKTG
EAGATGVDGSTGITGAQGPKGAIGEAGANGVQGEGGSKGSTGSVGQKGERGVEGQRGPAG
AGGPKGMFGSIGKVGLNGLPGGRGSVGDPGPFGPPGRVGPEGPTGGSGNPGQKGDRGYQG
TDGYPGSPGLPGPPGPPATLSSAWTSEAMQSYELGVQKTPENRLYKSRKPKTGEYEPESP
TEAFDDIITLSFEIQSFKRPTGTKLFPAKTCKDLHMCHPNLRSGNYWIDPNEGIPEDAIY
VFCDFENNATCIYPQNTSKSFESARKNWYSGPDQYKWFGKELQGLGSMKYTFDPSQMTFL
RLLSDRARQNITYHCRNSAAWFNKENSDYTHSIKIMGDNGIELHASSSNKFKPTIIRDDC
HIKDGKWRKTVVSIDTTKPQRLPVHDVAVYDIGGKEEEFGLDIGPVCFS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggacctgacactgctggcgtttcttgcaggattgttctatttcaccgtagatcaaaca
aactgtcaggattgctccaaaccactggatgttggaatattacttgacgcgtcaggtagc
atcggtagaaggagatgggcaaaagttgtcaattttgcccagtccatggtgaactccttt
aaagtctccgaaggaggttcccatgttgcaatactactttacagtaccaagacatcaatc
gaagtggggttcaatacatttactggagcacagaggacggcttctaacatcaatgctaaa
atagcggcaataaactatcggaactggaaagggctgacctacattgatcgtgggctcaag
acggcaaatgaagaactgtttaccgcagaagctggaatgaggacaagtgacgacattaaa
aagattctcatcttattcacggatggtaaacaaacaaaggacagggatccctacacagag
ctgaacgtagcttcacagccaatgaaagacaaaggaattgaaatatatgcactcggtgtt
gggaaatcctcgagcataaatgttaatgaattgcagcaaatagcaagcaaaacagaaaat
gtctatacagccgagacttttgatgaattagctacgcttgctataaagatcagtcgggct
tcctgtggcatcccgccacctgtcccacaagcgatttcttatacgagtgtcattggaccc
cctggactaccaggaacggttggcgagccgggacaattgggagccccaggattaagggga
ccaagtggaagaccaggatctgagggagataaaggtgaacctggagacagtggaccaact
ggacccaatggtcccccaggcccccctggtccacccggccctcccaaagtcatgacaata
ccaggaccaaaggggcctgttgtagtacctcaaattaactatggaggagctggagagtta
cagagagttggagatccgggaccaccaggacgacctggatcaagaggtcctgatggtatc
cctgggcccccaggagctcgtggaacgccaggagatcgtggaccaaatggcttacaaggt
gtgatgggaccgccaggaccaccaggacgcaacggcgaagatggtgatgcaggaggccca
ggaagaaacggcccaccaggtgatcctggacgaaagggacctcgtggtgatcgaggcaaa
gctggatcagaaggaaagagaggacatcaaggaagatcaggacgcactggaactaaagga
gatcgaggagttgatggagagaagggagcggttggagataccggactgaatggaatagat
ggcgtcgatggtgagcgtggaatgcgcggggttccaggacctattggagatccaggacca
gtgggttttcaaggaggaagaggtaatgcaggactttttggatctcagggtaaccctgga
caagctggcccagcgggaccatctggacctagaggacccaaaggagctcctggacgtgcc
ggctcaacaggccctttgggttacgccggcgaaacaggaacaactggtccaattggaccc
aagggaacgacaggtgccaatggtcaaaatggtaatcaaggagagccaggacctaaagga
gcatcgggagatttaggtgccgcaggagaacaaggaccaacaggagaagtgggaaccaga
ggcatggcaggtgaccccggcaaccgtggagaacgtggtagtaggggtgatatcggcaaa
aatggtgccgcaggagaaactggcaataaaggtggcccgggaaaacctggagtcaaagga
gcgcgtggacaaccagggccagttggaaaacgaggagcgcccggtgacagtggacaagct
ggtgcaccaggatcaacaggaaaacgaggtatgacaggagcacaaggttttatgggccca
accggcgctaaaggagcaaagggaggagttggaggcgatggaaagcgtggagcagaaggc
aacaagggagaccctggcgaaaccggtgagcctggtggtgttggccagaccggagaacaa
ggtgcacgtggacgagttggtgttgccggacgtgatggagggccaggcttacccggaaaa
cccggagacgatggcagagaaggcgagaacggatcaccgggagaacgtggaccctctgga
caaaccggccttactgggaaaaaaggcgctagaggccaagctggtaaaaacggtgtgatt
ggaagaagtggaccagctggcatcaagggtcaacaaggaataattggagaaagaggatta
cctggtggacctggagggccgggacttgctggtgcgttgggagaaaccggtccaggagga
gatccaggagatccgggtccagttggaaagaacggaaagcctggaccttcaggtttatcg
ggcaaagatggagccaagggtaacagcggtgcaaacggccaacctggacgtagaggctta
gatggcaagactggtgacaggggagagggtggtgacatgggtgttcctggacgtaatggc
gagcgtggtatcgaaggtcggcaaggaataaggggcgtccctggagcccctggcacaatc
ggtagcgatggacctccaggcacatcgggttcccctggcttacctggacaaccaggcaaa
aatggagccaaaggagaacagggtgatcaaggaggtgaaggaccacgtggagaggatggc
gaaaacggcaaacagggcgcagatggtggtgacggtgggcgaggacctattggccccaag
ggcctagcgggtgaacgtggtgatgatggagcagcaggtggacctggaacaaccggagac
acgggaatgcgtggtgatacaggtgtcatgggaaaacctggtctgcagggacttccgggt
tctgcaggccctgctggcgcaattggtctcgtaggcccacaaggtggaaagggtgtcaga
ggagaacgtggagcaatgggttctttaggagccactggtttgatyggtgatgttggtgct
gctggtccaaaaggaagtattggaagccagggatcatctggagaacaaggaggtcctgga
ggacgcggtcaacccggcccacctggcccaacgggtcctggtggaaatgctggcatacct
ggcccaccaggtcagcctggatctaagggacctccaggagattctggtgcacagggcgag
tccggagaggatggagcaagaggtgttgctggcaaagttgggccacttggatctaatgga
ggcgttggtgctaagggaccttctggatcaattggtttgcctggtgactctggctctggc
ggaccaaggggtgctgttggtcttcctggacaacctggtttggaaggtcctcgtggtttc
aagggtgaatctggtgaggctgctgctaacggcaaacctggacttcctggaccagcgggc
tcaatcggtgcaattggtaaaccaggcgccccaggaatcgctggtgccgatgggccaact
ggaacttcgggagccgctggtgcatcaggaagacctggtaggaagggtatagccggtgac
actggaaggcaaggacgacaaggtgaacaaggaggaaagggagcggctggtaaaactgga
gaggctggagcgacgggtgtggacggctcaacgggtataactggtgctcaaggaccaaag
ggcgcaataggagaagctggtgctaatggagtccaaggtgaaggcggtagtaaaggtagt
acaggaagcgtcggacagaagggagaacgcggtgtggaaggtcaacgaggacctgctggt
gccggtggaccaaagggaatgtttggttcaattggaaaagttggacttaatggtctgcca
ggaggaaggggttccgttggtgaccctggaccttttggaccaccaggaagagtgggccca
gagggtccaactggcggttctggtaatccaggacaaaagggtgaccgtggataccaagga
accgatggatacccgggatccccaggtctccctggccccccaggaccacctgcaacgctt
tcatcggcttggacatctgaggccatgcagtcgtacgaacttggagtccaaaagacgccc
gaaaaccgtctctacaaaagtcgcaaaccgaaaactggagaatatgaaccagaaagtcca
acagaagcatttgatgatattatcactctgagcttcgagattcaaagttttaagcgtccc
acaggaaccaagctgtttcccgctaaaacctgtaaagacctacacatgtgtcatcccaac
ctacgcagcggcaactattggatagatcctaatgagggcattccagaggacgctatctac
gtcttctgtgactttgaaaacaacgccacttgtatctatccacagaatacgtctaagtcg
ttcgaaagtgcgcgaaaaaattggtactcaggtcctgatcaatataaatggttcggtaaa
gaattacaaggcttgggatcgatgaaatacactttcgatcctagtcagatgaccttccta
cgtctactaagcgacagggctcgtcaaaacattacataccattgccgcaactcggctgca
tggttcaacaaggagaatagtgactatactcattccatcaaaatcatgggcgacaatggt
atcgaattgcacgccagcagttccaataaatttaagccaactatcattcgagatgactgc
catatcaaagatggcaagtggcgaaaaacggtcgtttcaatcgacaccaccaaaccgcaa
cgtctacctgtccatgatgtagctgtgtatgatattggaggaaaagaagaggagtttgga
ttagatattggtcccgtttgtttctcctag
DBGET
integrated database retrieval system
