Actinia tenebrosa (Australian red waratah sea anemone): 116295526
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Entry
116295526 CDS
T07455
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03020
RNA polymerase
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116295526
09124 Replication and repair
03420 Nucleotide excision repair
116295526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116295526
03400 DNA repair and recombination proteins [BR:
aten03400
]
116295526
Enzymes [BR:
aten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116295526
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116295526
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116295526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
bPH_3
EutB
Motif
Other DBs
NCBI-GeneID:
116295526
NCBI-ProteinID:
XP_031559225
UniProt:
A0A6P8I321
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MALVSGSPAPLKDVKRCQFGIFGPDEIKQMSVTTDGGVKYAETMEGGRPKLNGLMDPRQG
TIDRFSRCQTCAGNMTECPGHFGHIELAKPVFHVGFLSTSVKILRCVCFYCSKLLVDAND
PKVKEIISKSHNQPKKRMQHIYDLCKGKSLCEGGEDMDTTLQANPEAAEDTEKKMTHGGC
GRYQPKYRKTGLDLTAEWKRVNIGDDSSEKKINLTAERVHEIFKRISDEECEILGMNPKF
ARPDWMVITVLPVPPLPVRPSIVLSGTARSQDDLTHKLADIVKANNNLQRNELNGAAAHI
IAEDTRMLQYHVATLIDNEIPGLPRAMQKSGRPLKSVKQRLKSKEGRIRGNLMGKRVDFS
SRAVITPDPNLSIDQVGVPRTIAQNLTFPEIVTPFNIDSMQDLVRRGNNQYPGAKYIIRD
NGERVDLRFHPKPSDLHLQFGYKVERHIRDDDIIIFNRQPTLHKMSMMGHRIKILPWSTF
RLNLSVTTPYNADFDGDEMNMHVPQSLEAKAEISEIMMVPRNIVTPQSNKPVMGIVQDSL
TAIRKFTKRDVFLEKETVMNLLLWIPDWNGKIPQPCILKPKPLWTGKQICSMFIPGQVNV
IRLHSTHPDDEDSGPYKHISPGDTKVVIEHGELISGILCKKTLGTSSGSLIHVIAMELGH
EVGRSFYGTVQCVVNNWLLLEGHSIGIGDCIADSDTYDEIQKATRKAKKEVIEVIEKAHN
DELEPTPGNTLRQTFENQVNRILNDCRDKTGSSAQKSLSEFNNFKAMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFRHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTSETGYIQRRLIKAMEGLSIAYDGTIRNSNNQLIQLRYGEDGMDGTAIE
FQNIATMRPSTVAFEKKFHFEPGNERRLRRYLQEDVVREICSSANVLQEVEGEFNQLQED
RDLLRRIFPTGNAKVALPVNLSRLIWNAQKTFRINSRSPSDLHPLRVIEGVRDLSKKLIV
VSGEDHISKQAQFNATLLFNILLRSTLCTKRVAEEFHLTSEAYEWLLGEIETRFNHAFGK
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKRPKTPSLTVF
LIGQAARDAEMAKSVLCRLEHTTLRKVTANTAIYYDPDPQNTVIVEDQDFVNVYYEMPDF
DVSRISPWLLRIELDRKRMTDKKLTMEQISEKINLGFGDDLNCIFNDDNAEKLVLRIRIM
NNDVEKMQDDEDVDKMDDDVFLRCIEQNMLTDMTLQGIESISKVYMNLPHEDKKKRIVIT
EQGEFKAIQEWILETDGVSLLRVLSERDVDPVRTTSNDICEIFTVLGIEAVRKSVEREMD
HVISFDGSYVNYRHLALLCDIMTCRGHLMAITRHGINRQDVGCLMRSSFEETVDVLLDAA
AHAETDHLRGVSECIILGKLPRVGTGCFDLMLDAEKCKHGMEIATNIMGPGMGGPLAGSG
MFFGAAGSPSGMSPPTTPWNVATPAYPEAWSPGMGSGMTPGAASFSPAGSEAGGMSPGGF
SPLWSPNPQSPSSPGPSSPYIPSPAAGASPGYSPASPAFMPSSPSMSPASPSYSPTSPGY
SPSSPSTGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS
YSPTSPSYSPQSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPKYSPTSPTYSPTSPSYSPS
SPKYSPTSPSYTPQSPTYSPSSPSYSPSSPRYSPTSPRYTPTSPEYSPTSPKYSPTSPNY
SPTSPSYTPMSSRYSPSSPKYSPSSGGPSPSPEYSPTTPHYTPK
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggctctagtttcgggatcgccagctccgcttaaagacgtcaaaagatgccagtttggt
atctttggtccagacgaaataaaacaaatgtctgtgactaccgatggaggggttaaatac
gccgaaaccatggaagggggtcgtcctaagctgaatggactcatggatccaagacaagga
acgatcgaccgtttctctcgatgtcagacatgtgctggaaacatgacagagtgtcccggt
catttcggccacatagagttggcaaaacccgtatttcacgttggattcttgtcgacaagt
gtcaagatactccgctgtgtgtgtttttactgctccaagttgcttgtagacgcgaatgac
ccaaaagtgaaagaaatcatatccaaatctcacaaccaacctaagaaaagaatgcagcac
atatatgatctgtgcaagggtaaaagcctgtgtgaaggtggtgaagatatggatactact
ctccaggctaacccagaagcagcagaggatacagaaaagaaaatgactcatggtgggtgt
ggaaggtaccaaccaaaatacagaaagactggattggaccttacagctgaatggaaacgt
gtcaacataggtgatgactcaagcgagaagaagatcaatcttactgctgaacgtgtgcat
gaaatcttcaagagaatatctgatgaagaatgtgaaattcttggtatgaatccaaagttt
gctcggccagattggatggtcatcactgtacttcctgtccctccattacctgtaagaccc
tctattgtgttaagtggaacagcaagaagtcaggatgatttgacccacaaactggctgac
attgtcaaagcaaataacaatttgcaaaggaatgaattgaatggagcagcagctcacatc
atagctgaagacacacgcatgttacagtaccatgttgcaacactgattgataacgaaata
cctggattgcctagggcaatgcaaaaatctggtcgcccactgaagtcagtcaagcaacga
ttgaaaagcaaggaaggtcgtatcagaggaaacctgatgggaaaacgtgtggacttctct
tcacgtgctgtaatcacacctgatcctaatttatcaattgatcaagtgggtgttccaaga
acaattgcacaaaatctaacattcccagaaatagttacaccttttaacattgacagcatg
caagatctggtcagacgaggaaacaaccagtacccaggtgcaaaatacatcatcagagat
aatggagagagagttgatctgaggtttcaccccaaacctagtgatcttcatcttcagttt
ggttacaaggttgagcgacacatcagagatgatgatatcatcatattcaatcgacagccc
acactacacaaaatgtctatgatgggacatcgtattaagatcctaccatggtcaacattc
agacttaatctcagtgtaacaactccatacaatgctgactttgatggcgatgagatgaac
atgcatgtacctcaatcactggaagccaaggccgaaatatcagagataatgatggtacca
agaaacattgttacaccacagtccaataagcctgtcatgggtattgtacaggattctctt
actgcaatcagaaaattcaccaaaagagatgtattcctagaaaaggaaactgtgatgaat
cttctgctatggattcctgattggaatggcaagattcctcaaccatgcattctgaagcct
aaaccattatggactggtaaacaaatctgtagtatgttcatcccagggcaagtcaacgtc
attagattacacagtacacatcctgatgatgaagactctggaccttacaagcacatctcc
ccaggagacacaaaggtcgttattgagcacggtgaactgatctctggtattctatgcaaa
aaaacccttggtacatcgtctggcagtttgattcacgtcatagccatggagcttggacat
gaagtgggtcgttcattttatggtacagtccagtgtgttgtaaataactggctgctcctt
gagggccatagcattggcattggggactgtattgctgactctgatacttatgatgagatt
cagaaagcaactcgaaaggccaagaaagaggtgatagaggtcattgaaaaggcacacaac
gatgagttagagcctacccctggtaatactctacggcagacatttgaaaaccaagtcaat
cgtattctgaatgactgtcgtgacaagactggtagcagtgctcagaagagcttgtcagag
tttaataactttaaagctatggtggttgctggatccaaaggctcaaaaatcaacatatct
caggtcattgctgtggtaggacaacaaaacgtagagggaaagcgaataccatttggtttt
cgtcaccgtactttacctcactttatcaaggatgattatggtcctgagagcagagggttt
gttgaaaactcctacctcgcaggactaacaccaactgagtttttctttcacgctatggga
ggtcgtgaaggtcttattgatacagctgtcaagactagtgaaactggatatatccagcgt
cgtctaatcaaagccatggaagggctgtccatcgcctatgatggcaccattagaaactct
aacaaccagttgatccagttgaggtatggtgaagatggtatggatggtacagccattgaa
ttccagaacattgctactatgagaccatctactgttgcctttgagaagaagtttcacttt
gaaccaggcaacgaaaggcgattgcgacgatatttgcaagaggacgtggtaagagagatc
tgcagtagcgctaatgttttgcaagaagttgaaggcgagttcaaccagctacaagaagac
agagatctactacgcagaatctttccaacaggaaacgccaaggtcgctcttccagtaaat
ctgagtcgcctcatctggaatgcacagaagacgttcagaatcaacagcagatcacctagt
gatcttcatccactaagggttattgaaggagttcgtgatctttccaagaagttaatcgtg
gtatcaggagaagatcatataagtaaacaggcccagttcaatgccacccttctcttcaac
attctgcttcgatccacgttgtgtactaagcgtgtggcagaggaattccatttgacatca
gaagcatatgaatggcttcttggcgagatcgaaacaaggttcaaccacgcctttggtaaa
ccaggagagatggttggtgcattagctgcgcagtctcttggtgaacctgccacacagatg
acactcaacactttccattacgctggtgtatcagctaagaacgtaaccttgggtgtacca
cgtctaaaggaaatcatcaacgtctccaagagaccaaagacaccatctcttactgtcttc
ttgattggccaagcagcaagagatgcagaaatggctaagtctgtgctttgccgactagag
cacacgacgttacgtaaggtaacagccaacacagccatctattatgatccagatccccaa
aacacagtcatagtagaagatcaagatttcgtgaatgtctactacgagatgcctgacttt
gacgtgtctcgtatctcaccctggctgctgcgtattgagcttgatcgtaagagaatgact
gacaagaagctaacgatggagcagatttcagagaagatcaatctaggctttggtgatgat
ttgaactgtatcttcaatgacgataacgctgagaagctcgtgttgagaattaggattatg
aacaacgatgtagaaaagatgcaggatgatgaagatgtggacaagatggatgatgatgtg
ttccttcgatgtatcgagcagaacatgttaactgacatgactctacaaggtatagaatcc
atctccaaggtatacatgaaccttcctcacgaggacaagaaaaaacgaatagtcatcact
gagcagggcgagtttaaagctattcaggaatggattctagagacagatggagtcagttta
ttacgagttcttagtgaaagagatgtagatcctgtacgtactacatccaacgatatctgt
gaaattttcacggtgcttggtattgaggctgtacgaaaatctgtcgaacgtgaaatggac
cacgtcatctctttcgatggttcatacgtcaattatcgtcacttggcgttgttgtgtgac
atcatgacttgtagaggtcatttgatggctataacaagacatggaataaacagacaagac
gtggggtgcttgatgagaagttcctttgaggaaacggttgatgttctcctggacgcagca
gctcatgctgagacagatcatcttcgtggggtcagtgagtgtattatcttaggcaagctg
ccaagagtaggaacaggatgctttgacctcatgctggacgctgaaaagtgtaaacatggc
atggagattgctactaacatcatgggacctggcatgggaggacctttagcaggttctggt
atgttctttggtgcggctggttcgccaagtggaatgtcaccaccaaccactccatggaat
gtagcaactcctgcatatccagaggcatggagccctggtatgggtagtggcatgacccca
ggagcagcaagcttctcaccagctggatcagaggctggtggaatgagtccaggaggattt
agtcccttgtggagtccaaatccacagtcaccctcctcacctggaccttcaagtccatac
attccaagccctgcagctggagctagtccgggttattcaccagcaagcccagcttttatg
ccaagttctccatcaatgtcacctgcaagtccctcatattctccaacatcaccaggatat
tcaccatcttcaccttctactggatattcaccagcaagtccaagttattcaccaacctcg
ccttcctattcacctacttcaccatcgtattcccctacttcaccatcatatagtccctcg
tcaccctcatattcgccaacctccccgtcatattcccctacctctccatcatattcccct
acatcaccatcatattcgccaacttccccttcttattctccaacatcaccatcttattcc
cctacttctccttcttactcccctacctctccaagctacagtccaacctctccatcatat
tctcctacatctccatcttattcccccacttccccttcttattctccatcttcaccatcc
tattctcccacttctccgagctattctcctcaatctccatcatattctccaacttctcca
tcatattccccttcctcccccaagtactcgccaacttctccaagttattctccaacttca
ccaaagtacagcccaacctcaccaacttattcaccaacttctccctcctattcgccatca
tctcccaagtactcgccaacatcgccatcatatacccctcaatcaccaacttattcccct
tcatcaccttcatattcaccctcatcgccaagatactcaccaacgtcaccgaggtataca
cctacctcaccagaatattccccaacctcgcctaaatacagtccaacttctccaaactac
tctcctacatcgccaagctatacgcccatgtcgagccggtacagcccgagctcaccaaag
tatagcccatcttcaggaggaccatcgccttctcctgagtactcgcctactacaccacac
tatactcctaagtaa
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integrated database retrieval system
