Actinia tenebrosa (Australian red waratah sea anemone): 116297211
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Entry
116297211 CDS
T07455
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03020
RNA polymerase
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116297211
09124 Replication and repair
03420 Nucleotide excision repair
116297211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116297211
03400 DNA repair and recombination proteins [BR:
aten03400
]
116297211
Enzymes [BR:
aten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116297211
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116297211
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116297211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
116297211
NCBI-ProteinID:
XP_031561253
UniProt:
A0A6P8I0J9
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MSGIYDHDDDAGYGEDEGEDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQ
RIVEDSPEIELQAESQHMTAETETPAKYVLKFEQIYLSKPTHWEKDGAPSPMMPNEARLR
NLTYSAPFYVDITKTRIKENEEPQTVTHSKMFIGKIPIMLRSTYCLLSNLNDRDLTELNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSKKDSKYSYTAEIRSCLEHSSRPTSSMW
VSMLAKGSQGGRRSAIGQRIVGSLPYIRQEIPIMIIFRALGFVADRDILEHIIYDFDDQE
MMEMVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYTKEILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVR
MYAQKFIDRGKDFNIELALKPKVITDGLRYSLATGNWGDQKKAHSSRAGVSQVLNRLTFA
STLSHLRRLNSPIGREGKLAKPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGS
QPSPILEFMEEWTMENLEEITPSAINNATKIFVNGCWVGIHRDPDQLMSTLRKLRRRMDI
IVSEVSMVRDFREREIRIYSDAGRICRPLLIVENQKLLLKKNHIDMLKEREYNDYSWQDL
VAGGIVEYIDVNEEETVMVAMTPDELVEKGQAYCSTYTHCEIHPSMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGI
NAIVAIASYTGYNQEDSVIMNASAIDRGLYRSVFYRSYRDQESKKGLDQEETFEKPTRDQ
VSGMRNAVYDKLDEDGLIAPGIRVSGDDVIVGKTSTLPDNDDELEGTARKYSKKDASTFL
RPSETGIVDQVMVTINQEGYKFTKIKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPF
TCEGLSPDVIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISQLLN
DYGYHLRGNEVLYSGFTGRKLNTQVFLGPTYYQRLKHMVDDKIHSRARGPLQILTRQPME
GRSRDGGLRFGEMERDCMIAHGAAQFLNERLFEVSDPYSCHVCNLCGLIAIANLRNNTFE
CRGCKNKTQISRIRLPYAAKLLFQELMSMSIAPRMMVCDPVK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtatttacgaccacgatgatgatgcaggttatggagaggatgaaggtgaagat
atcacgccagatttgtggcaggaagcatgctggattgtcattagttcgtacttcgatgaa
aagggtcttgtcagacaacaactggattcgttcgatgagtttattcagatgtcagtgcaa
agaattgtggaagattcaccagagattgagttacaggctgaatcacagcacatgactgca
gaaactgagactcctgccaaatatgtccttaagtttgagcaaatctacttgtctaaacca
acccactgggaaaaagatggagctccaagccctatgatgcccaatgaagccagactacga
aacttaacttattcagctcccttttatgttgacatcacaaaaactcgaataaaagaaaac
gaagaaccacagacagttacacacagtaaaatgttcattggaaagatcccaatcatgttg
agatcaacatactgtctcctcagtaatctcaatgatcgtgacttaacagaactcaatgaa
tgcccattagatcctggaggatacttcatcattaatggctccgaaaaagtccttattgcg
caggagaaaatggctaccaatacagtatatgtattctcaaagaaagattccaaatattct
tatactgcagagattcgatcttgtctagagcattcatctcgtccaactagctcaatgtgg
gtgtcgatgttggctaaaggaagtcaaggtggacggcgaagtgctattggtcagaggatt
gttggatctctgccctacatcagacaggagattcctatcatgattattttcagagctctg
gggtttgttgctgatcgtgatattttggagcatattatttatgactttgatgatcaagag
atgatggaaatggtaaaaccatccctagatgaagcctttgtcatccaagaacaaaatgtt
gccttgaacttcattggttctcgtggtgcacgaccaggagtaaccaaggagaagcgtatt
aaatatacaaaggaaattctacagaaggaaatgttgccccatgttggtgttagcgatttc
tgtgagaccaaaaaggcatacttcttagggtatatggttcacagactgttattggcagct
ttaggaagacgagaacttgatgatcgtgatcactatggcaacaagagattagatcttgct
ggaccactgcttgctttcttgtttagagggttattcagaaacctcatgaaagaagtgcgt
atgtatgcacaaaaatttattgacagaggcaaggattttaatattgaacttgcgctgaag
ccaaaagtaataacagatggtcttcgttactcccttgctacgggtaactggggagaccag
aagaaagcccactcttcacgtgctggagtatctcaagtattgaacaggctaacatttgca
tcaacactctcacatttacgacgtctcaattctccaattgggagagaggggaaattggcc
aagccacgtcagttacataatacacattggggtatgatctgccctgccgagactcctgaa
ggtcatgccgtagggctcgtaaaaaatttggctcttatggcttacatctctgtgggctcc
cagccaagtccaatcttagaattcatggaagaatggaccatggagaacttggaagaaatc
actccttctgctattaacaatgctaccaagatctttgtgaatggatgttgggttggtatc
catagagatcctgaccaactcatgagtacactcagaaaactgagacgacgtatggacatc
attgtatctgaggtgtctatggtaagagatttcagagaaagagaaataagaatctattct
gatgcaggccgcatctgtcgccccttgctgattgtggagaaccaaaagctattattaaag
aagaatcatattgatatgttaaaagaaagagaatacaatgactacagttggcaagatctt
gttgctggaggtattgtagagtacattgatgtcaatgaggaagaaactgtcatggttgct
atgacgccagatgagctggtcgagaaaggccaagcatattgttctacatatactcactgt
gagatccacccatcgatgattctgggtgtctgcgcatctattataccattccctgatcat
aaccagtcacctcgtaacacttaccagtccgctatgggtaaacaagccatgggtgtgtac
attacaaattaccatgtacgtatggacacgctggcacatgtgctttactaccctcaaaaa
ccacttgtcaccacccgatccatggaatacctgaggttcagagaactgccagcaggaatc
aatgctattgtagctattgcatcctacactggttataatcaagaagattctgtcatcatg
aatgcttcagccattgatcgaggcctctacaggtctgttttctaccgatcatatcgtgat
caagaatcaaaaaaaggtcttgatcaagaggaaacatttgagaaacctacaagagaccaa
gtatcagggatgagaaatgctgtctatgacaagctggatgaagatggtctcattgctccc
ggtatacgtgtcagtggtgacgatgtcattgttgggaagaccagtaccctccctgataat
gatgatgagttggaaggaacagcaagaaagtatagcaagaaagatgcaagtaccttcctc
agaccaagcgaaactggtattgtggaccaggtgatggttactattaaccaagaaggttat
aagttcactaaaatcaaggtccgatctgtacgagtaccccagattggtgacaagtttgct
agtcggcatggacagaagggaacttgtggaataacctatcgacaggaggacatgccgttc
acgtgtgaagggttaagccctgatgttatcatcaacccacatgctattcccagtcgtatg
acaattggtcacttgattgagtgcctgcaaggaaaggtttctgccaataagggagagatt
ggtgatgccactccctttaatgatgccgtcaatgtacagaagatctctcaacttctaaat
gattatggctaccaccttcgagggaatgaggttttatacagtggatttactggtcgcaaa
ctcaacacacaagtgtttcttggaccaacatactatcagcgtctcaaacacatggtggac
gacaagatccattctagagctcgtgggccacttcagatattaaccaggcagcctatggaa
ggcagatcacgtgatggtggtcttcggtttggagagatggaacgtgattgtatgatcgcc
catggagcagcacaattcctaaatgaacgtctctttgaggtttctgacccttacagctgt
catgtatgtaacctttgtgggctcattgccatcgccaacttaaggaataacacctttgag
tgccgaggatgcaaaaacaaaacacagatttcaagaattcgtttgccatatgcagccaag
ttgttattccaagagctaatgtccatgagtatagcgccaagaatgatggtttgtgatcca
gtcaagtga
DBGET
integrated database retrieval system
