Actinia tenebrosa (Australian red waratah sea anemone): 116297212
Help
Entry
116297212 CDS
T07455
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116297212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116297212
03009 Ribosome biogenesis [BR:
aten03009
]
116297212
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116297212
Spliceosome [BR:
aten03041
]
Complex A
U2 snRNP components
U2 related factors
116297212
Complex B
116297212
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116297212
Ribosome biogenesis [BR:
aten03009
]
Eukaryotic type
90S particles
Helicases
116297212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
ABC_tran
ResIII
SRP54
Flavi_DEAD
AAA_7
TsaE
AAA_30
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
116297212
NCBI-ProteinID:
XP_031561254
UniProt:
A0A6P8HY08
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MSKRRLDVAGNMNSGLSTAKRIKEELSNPSNLRGKINPYNGRPFSDRYFDILRKRIELPV
WEYREQFMEIVKKNRVLALVGETGSGKTTQIPQWCLEVRTDKTKKVACTQPRRVAAMSVA
QRVADELDVVLGQEVGYTIRFEDCTGPRTAMKYMTDGMLLREAMTDPLLERYSVILLDEA
HERTLATDILMGLLKEVVKQRQDLKIIIMSATLDAGKFQEYFDNCPLMTIPGRTHPVEIF
YTPEPERDYLEAAIRTVIQIHMCEDIPGDILLFLTGQEEIEEACKRIKKEIENHGIDVGE
LKCIPLYSTLPPQQQQRIFEPAPPNRPNGAIGRKCVIATNIAETSLTIDGVVFVIDPGFS
KQKVYNPRIRVESLLVSAISRASAQQRAGRAGRTRPGKCFRLYTEKAYQSEMPQNTYPEI
LRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDNGDLTELGNMM
AEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQVFLRPNEAKKASDEARMKFAHIDG
DHLTLLNVYHAFKQNHDDAQWCYDNFIQQRSLKSADSIRTQLARIMDRFKMARKSTDFNS
RDYYLNIRKALVSGFFMQVAHLERSGHYLTVKDNQVVQLHPSTCLDHKPEFVLYNEFVLT
TKNYIRTVTDIKPEWLIKNAPVYYDMRNFPNCEAKRVLERIIEKLQRIK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgaaggctagacgtcgctggaaatatgaacagtggcttatctactgctaaa
aggatcaaagaagagctaagtaatccttccaatcttcgagggaaaatcaacccctacaat
ggccgcccgttttctgaccgttactttgacatactacgcaagagaattgaacttccagtc
tgggaatacagagaacaatttatggaaattgtcaagaaaaatagagtgcttgctcttgta
ggtgaaaccggatcaggaaaaaccactcagattccccagtggtgtttagaggtgaggaca
gacaaaaccaagaaagttgcttgtactcagcccaggagagtagcagcaatgagtgtagcg
caacgtgttgctgatgagttagatgtagtgttgggacaagaagtgggttataccattcgt
tttgaagattgtacaggtcccagaacagcaatgaagtacatgacagatggtatgttgtta
cgagaagccatgacagatcctttactagaacgatacagtgtaatacttcttgatgaggct
catgagaggacactagctacagatatcttaatgggtctactaaaagaggttgtaaaacaa
agacaagatctcaagattattatcatgagtgctaccctagatgctggaaaattccaggaa
tactttgataattgtccacttatgaccatcccaggaagaacacatcctgtagaaatcttt
tatactccagagcctgaaagagattacttagaagccgcaatccgtactgttattcaaata
cacatgtgtgaagacattcctggggacatcttgttgtttctgacaggacaagaggagatt
gaagaagcctgtaaaagaataaagaaagaaatagagaaccatggcattgatgttggagaa
ctgaagtgtattcctctctattccacccttcctccacaacaacagcagcgtatattcgaa
ccagcacctcccaacagacctaatggtgctataggacgcaagtgtgtcatagctacaaac
attgccgaaacgtctttgactatcgatggtgtggtttttgtgattgatcctggattctct
aagcaaaaagtatacaaccctcgtatcagagtagagtctctactagtgtctgctatatcc
agagctagtgcacagcagcgtgcaggtcgtgcaggccgtactcgcccaggaaagtgtttt
agactttacacagagaaggcttatcaatcagagatgcctcaaaacacatatcctgagatc
ctgaggtctaatcttggtactgttgtgctacagttgaagaagctaggtattgatgatctg
gtacattttgattttatggatcctccagctccagaaactttaatgcgtgctcttgaactc
ctcaactatcttggagcattggatgataatggtgacttgacggaactcggcaacatgatg
gcagagtttcctctggatccacagttagccaagatggttatcgctagttgtgaattcaac
tgttctaatgaaattctgtctattacggctatgctgtcagttcctcaggttttcttgaga
ccaaatgaagccaaaaaggcttctgatgaggcaagaatgaaatttgctcacattgatggt
gaccacctgaccctattgaatgtctatcatgcctttaaacagaatcatgatgatgcacag
tggtgctatgacaacttcatccaacagcgttctctgaaatctgccgacagcatccgaaca
cagctggcacgtataatggaccgtttcaagatggcacgtaagagtacagacttcaacagc
cgtgactactacttgaacatcaggaaggcattggtgtctggattcttcatgcaggtggca
catctagaaagatctggacactacttgacagtcaaggacaatcaggttgtgcagcttcat
ccatcaacatgcctggaccacaagccagagtttgtattgtacaatgaatttgtattaact
accaagaactacatcagaacagtcacagacatcaaaccagagtggctaatcaagaatgca
ccagtgtactacgacatgaggaatttcccaaactgtgaagccaagagggttttggagagg
ataatcgaaaaacttcagagaataaagtga
DBGET
integrated database retrieval system
