Actinia tenebrosa (Australian red waratah sea anemone): 116297360
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Entry
116297360 CDS
T07455
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116297360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aten03009
]
116297360
Ribosome biogenesis [BR:
aten03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116297360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_WDR19_1st
Beta-prop_SPT8
Tricorn_2nd
PgaPase_1
Beta-prop_DCAF4
KNTC1_N
Beta-prop_Aladin
DUF6476
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
116297360
NCBI-ProteinID:
XP_031561436
UniProt:
A0A6P8I1P2
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MRITMEEFESRNTLIWDVHITSDYTIITGDSLGNTQFWDGKLGTLIESYNAHKADVLSLC
INEEEDTVFSAGVDSKIVSFKLTKKGQNKKWIKTNSNRVHTHDVRALAMNEPKDMLVSGG
VDTKLAVYSLSKFTESNPKLVPPFPHKSFISVASDANIVMDQCQRSLRFWKLGETDVEST
VIQKLPTQLLQIKAKGDNHIMCSALASCSSWVAFSDIDHVSLFKVNLLSEDATKFQVSRV
LPMPPDLLPAQKMVFTPDGLKLICATNQHSIQVLEISEEVTLASTIHLPAANENDLPAMC
LLAVSHDGQWLSCVDSRNAVNVIDINNNKIHSTLPTFSSYVTAMAFQPETQFLAIVCSDK
QIFMYNTNTSKLTDWSKQAAAQGLPKEWVQRHQKIVGITFDPSCSDLMILQDHEIFTVIB
MREPLPEPDVAIFEKIVKPEENRKRPFKADLEDKHWKAKTAKLDTVEEKGKKKGKEQKEK
ERPKEKSESKELKSFKICKKYKPLLFLNFCRDGALVVVERPLLSMLETLPPTLQRKRYGK
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagaataacyatggaggagtttgaaagtaggaatacactgatatgggatgtgcacatc
actagtgactataccattataactggtgattctctcggcaatacacarttctgggatgga
aaactaggaactttaatcgagagttacaatgcccataaagctgatgtcctgtcactgtgt
ataaatgaggaagaagatacagtgttttcagctggtgttgacagtaaaatagtcagcttc
aaactaaccaaaaagggacagaacaagaaatggatcaagacaaattcaaacagggttcat
acccatgacgtcagagcactggctatgaacgaacccaaagacatgctggtatctggaggt
gttgatacaaaactggcagtttattcactctcaaagttcaccgagtcaaaccctaagctg
gttccaccatttcctcataaatctttcatctcagtcgcatctgatgctaacattgtaatg
gatcaatgtcaaaggtctttacgattttggaagctaggagagacagatgtggaaagcact
gtgatacagaaactgccaactcagttactgcagatcaaagccaagggagataatcacatc
atgtgtagtgcgctggcatcatgttcatcctgggttgcgttctctgatatcgatcatgtc
agcttgttcaaagtcaayttgctttctgaagatgctaccaaattccaagtttcaagggtt
ttgcccatgccgccagatctactaccagcgcagaaaatggtgttcacccctgatggactg
aaactgatttgtgcaaccaaccaacattctatacaggtgttggagattagtgaagaagtt
acacttgcttcaacaattcatcttccagcagcaaatgaaaatgatctycctgcaatgtgc
ttattggctgtgtctcatgacggacagtggttatcatgtgtagacagtagaaatgctgtc
aatgttatcgacatcaacaataataagattcattcaacactacccacttttagcagctat
gttacagccatggcgtttcaaccagaaacacagtttctagcaattgtttgttcagataaa
cagattttcatgtacaacaccaacactagcaagctaacagactggtccaagcaagctgca
gctcaaggcctccctaaagaatgggtccaaagacatcaaaagatagtcggcatcaccttt
gatccttcatgttctgacctcatgatcctacaggaccatgagatatttactgttatarac
atgagagagcctttgcccgaacccgatgtagctatatttgagaaaatagttaaaccagag
gaaaatagaaaaaggccgttcaaagccgatttagaagacaaacattggaaagctaagact
gcaaaactagatacagttgaagaaaaagggaagaagaagggaaaagaacaaaaggaaaag
gaaagacccaaggaaaaatctgaaagtaaagaactgaaatcttttaagatttgcaagaag
tacaagccattactttttttgaatttctgtcgagatggtgcgttggtcgttgtggaaagg
ccgttgctcagtatgttggagaccttaccaccaacactacaaagaaaacgttatggaaag
acctaa
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