Actinia tenebrosa (Australian red waratah sea anemone): 116297410
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Entry
116297410 CDS
T07455
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116297410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116297410
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116297410
Spliceosome [BR:
aten03041
]
Complex C
Other components
Step II factors
116297410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
nSTAND3
AAA_22
T2SSE
nSTAND_NTPase5
ATPase_2
cobW
NB-ARC
TsaE
AAA_7
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116297410
NCBI-ProteinID:
XP_031561491
UniProt:
A0A6P8I1S6
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MMSSSAFEGGFSDRLEGTNETVGGLIIKKPTSKHKFEKPKGSVLGLQELAKEKRREKEEL
LRDDAKKSKLASKSEDWEDGDDEDYKDKGKIFSSRDREKEKSRHYRTHIEDTPSHTGGVS
NEAREKQLRRQERERERRGQGVYAESRDKSDKNRDRDRDRGRGGDRRDDRGRYGDRSDRR
FKEPRSRRSDWEDTPSRSRRSTERDDYTPQHKTKGLRTPSRSTWDDEDMSPSRSKWEMPS
PTRSIKDDTDKGYTRLVDDTPRFTPTHKYNAWADDRRHSGATPRFSKGKARRRNKDEGQN
SPDRQEHGKDDDFDQEEWEEEQKRLDRAWYDMDNGYDESHNPFADVSEEYTKKKEENLAK
KAVKRISAQQRQYNKDNDMWETNRMLTSGVVQKLEVDEDFEEENEAKVHLLVHNIVPPFL
DGRIVFTKQPEPVIPVKDATSDMAIISRKGCLVVRRFREEKEKKKSQHKHWELAGTKLGN
IMGIKEDKGEEMDVKDDDYKKNQKFAEHMSSNSSEATSDFATKKSFAQQRQFLPIFAVRQ
ELLNIVRDNQIVIIVGETGSGKTTQLTQVISRRRDLKLIVTSATMDAQKFADFFGNVPTY
KIPGRTFPVEIFFSRTVLEDYVESAVKQALQIHLTPTKGDILIFMPGQEDIEVTCELITE
RLSEVDEAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCVVATNIAETSLTVDGIMFVID
AGYCKLKVYNPKIGMDALQVYPISQANANQRSGRAGRTGPGQCFRLYTENSYNNELLYTT
VPEIQRTNLANVVLLLKSLGVQNLLEFHFMDPPPQDNILNSMYQLWILGALDNTGALTPL
GRQMVEFPLDPAMSKMLIVSVDMDCSDEVLTIVSMLSVPAIFYRPKGREEDSDAAREKFA
VPESDHLTYLNVYLQWKTNNYSAQWSNEHFIHVKAMRKVREVRGQLKEIMLQHKIPLKSC
GNDWDVIRKCICSAYFHQAAKLKGIGEYVNMRTGMPCHLHPTSALFGMGYTPDYIVYHEL
VMTSKEYMQCVTAVDGNWLAELGPMFYSIKESSRSRAENRRRAKDRATAMEEELAAASEQ
MKVREEERLNKMTPSVRTQIVTPGRRTPATPKRTPKRFGI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcctctgcattcgaaggaggatttagcgacagactcgaaggaacaaatgaa
acagtaggaggattaatcatcaaaaagcctaccagtaaacacaagtttgaaaagcctaaa
ggaagcgtacttggcttgcaagagctggccaaagaaaagcgaagagagaaagaagagtta
cttagagacgatgcaaagaaatcaaagttagcgagtaaatcagaagattgggaagatggt
gatgacgaagattataaggacaagggtaaaattttctcatctagagatcgagagaaggag
aagtcgcgccattatagaactcatattgaggatacgccatcgcatactggtggagtgagc
aacgaagcacgcgagaaacaactcagacgacaagaaagagaaagagagagacgaggtcag
ggagtttatgctgagtctagggacaaaagtgacaagaacagggatagagatagagataga
ggtaggggtggggatagacgtgatgacagagggaggtatggtgataggagcgataggaga
tttaaagaaccaaggtctaggagaagtgactgggaagatacgccatcaaggagtagacgg
tcgacagaaagggatgactacacaccacagcataagacaaaaggtttacgaacaccatct
agaagtacatgggatgacgaagacatgtcaccatccaggtccaaatgggaaatgccttca
ccaacaagatccatcaaagacgatacagataaaggatacactcggcttgttgatgacaca
cctcgttttactccaacacacaagtataatgcatgggcagatgacaggaggcactcagga
gcaacaccgaggttttctaaaggaaaagctaggagaagaaataaagatgaaggccaaaac
tcaccagacagacaggaacatggtaaagacgacgactttgatcaagaagaatgggaggaa
gaacagaagaggttggatcgtgcatggtacgacatggacaatggatacgatgaatcacat
aatccatttgctgatgtcagtgaggaatacaccaagaaaaaagaagaaaacttggctaag
aaggcagtcaagagaatttcagcccagcagagacaatacaataaggacaatgacatgtgg
gagacgaatcgtatgttaacgagtggtgttgtacaaaagcttgaagtggatgaagacttt
gaggaagaaaatgaagcaaaagttcatttgttggttcacaatattgtaccaccttttctt
gatggaaggattgttttcacaaagcaaccagaacctgttatcccagtcaaggacgccaca
tctgacatggccatcatatccaggaagggttgtctagtagtccgtcgattccgagaggag
aaggagaaaaagaaatctcaacacaagcactgggagcttgctggtacgaagcttggtaac
atcatgggaatcaaagaagacaaaggagaggaaatggatgtcaaggacgatgactataaa
aagaatcagaaatttgcagaacacatgtcaagcaattcaagtgaagcgacaagtgatttt
gctacaaagaaaagctttgctcagcagcggcagttcctaccaatatttgccgtcagacaa
gagttgctaaacattgtgagggataatcaaatagtgattatcgttggtgagacaggctca
ggcaagactactcagcttacacaagtaataagcagaagacgtgatttaaaactcatagtt
acctcagctactatggatgcacaaaagtttgcagacttctttggcaacgtaccaacatat
aagattccagggagaacatttccagtagaaatatttttcagtcgtactgtgttggaggac
tacgttgaaagtgccgtgaaacaagctctgcagattcacttgactccaaccaaaggagac
attctgattttcatgcctgggcaagaggatattgaagtgacatgtgaactcatcacagag
agactgagtgaagtagatgaagcgcctccactagctgtactccccatctactcccagctg
ccttcagatttacaggcaaagatctttcaaaaggctcctgatggcgtcagaaaatgtgtg
gtggccacgaatattgcagaaacttcattgacagtggatggtatcatgtttgttatcgat
gctgggtactgcaaacttaaagtctacaatcccaagattggtatggatgcacttcaagtg
taccctatcagccaggccaatgccaaccaaaggtctggtcgtgcaggaagaacaggtcca
ggacagtgcttcaggctgtacactgagaactcttacaacaacgagctgctgtacaccact
gtccctgaaatccagaggacaaacctggctaacgtcgtactgttactgaagtcactcggg
gtgcagaatctactggagtttcacttcatggatccaccaccacaggacaatattctcaac
tcaatgtatcagctatggatactaggagcactagacaacacaggcgcactaactccacta
ggaagacaaatggtagagttccctctggacccggccatgtcaaagatgctgatagtctct
gtggacatggactgtagtgatgaagtactgacaatagtctcaatgctgtctgtgccagcg
atattctatcgtcccaaaggaagagaagaggacagcgacgcagctcgtgagaagtttgcc
gtgcctgagagcgaccatctgacgtacctgaacgtctacctgcaatggaaaacaaataat
tattcagctcagtggagcaacgagcatttcattcatgtcaaggccatgagaaaggttcgt
gaggtcagaggtcaacttaaagagatcatgcttcagcacaagatccctctcaagtcttgt
ggtaatgactgggatgtgattaggaagtgtatttgctcggcttacttccaccaggctgct
aaactcaagggtatcggtgagtatgtgaacatgcgtacaggcatgccctgccacctacac
cctaccagcgctctatttggcatgggatacacacctgattacatcgtctaccacgagctc
gtcatgacttccaaggaatacatgcagtgcgtcacggctgtggatggcaactggttagca
gaactaggccccatgttctactctatcaaagaatcttctcgatcaagagcggaaaatcgc
cggcgagctaaagatcgagcgactgcgatggaagaagaactggccgcagcaagtgagcaa
atgaaagtaagagaagaggagagactcaacaagatgacaccatcagtaagaactcagatt
gtaactcctggcagaagaactccagccacgcccaaacgaacacccaaacgattcgggatt
tag
DBGET
integrated database retrieval system
