Actinia tenebrosa (Australian red waratah sea anemone): 116298021
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Entry
116298021 CDS
T07455
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116298021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116298021
03036 Chromosome and associated proteins [BR:
aten03036
]
116298021
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116298021
Coactivators
SAGA/TFTC/STAGA complex
116298021
Chromosome and associated proteins [BR:
aten03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116298021
STAGA complex
116298021
TFTC complex
116298021
SAGA complex
116298021
SLIK complex
116298021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Nup120_160
VPS8_N
LisH
Motif
Other DBs
NCBI-GeneID:
116298021
NCBI-ProteinID:
XP_031562220
UniProt:
A0A6P8IBL6
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MASNTTTSTTSNSKPSSTDKEKETLRAVLQFLKNKKLTETEKIFRQETNCVGNDSELNLE
TSSDIDTDISSVLSAYNSEADPSRYDEYYTSLQVFVEKSLDVYKPELAMVQYPLFIHMYL
ELVYKGYEKNAQSFFTKFRECQEDYHEEDLRRLSSITRREHMDKNEFMGTLRSNKFVIRM
SRDTYQVLKKYLQDTQQETLLTVIQQHLHFDVFDGRPRHKSSIDATSGGITGEATFEANK
TKVLYGLQPEPDFGITIEDENEEEDDKDKPKKKKTKKENGTGRKKFEFNPNAPPLNRIPF
PELRDSDKLRKAQVLREKAKRLKLDAETLPSICFYTQLNSHEGXICASISEDATLLSAGF
EDSIIRVWSLTPRKLRSLKPPSELNKIDKEAEDVMERIMDDKTATDCRRLVGHSGPVFAV
SIVHDNMYLLSCSEDKTIRLWSLYTFTTLVCYKGHNYPVWDVQFCPRGHYFASSSHDRTI
RLWSTDHQQPLRIFSGHVSDVNKVAFHPNCNYLASGSSDRTVRLWDIQTGTSVRLFTGHK
GPIHALAFSRSGRYLVSSGVDKRILVWDLAEGTLTTELKGHKDTVYSLCFCRDGNILASG
GLNNCVKLWNAKAICNPEEDEDDPHGELDKSAVYELGSYPTKNTPIHCLHFTYRNLLLAT
GPFNSI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacacgacgacttcaacaacatcaaactctaaacccagctcaaccgacaaa
gagaaagaaacactacgagctgttctgcagtttctaaaaaataagaaactaactgaaaca
gagaaaatctttcgtcaagagacgaattgtgtgggaaatgacagtgaattgaacctagaa
acatcgtctgatattgatacagacatatcctctgttttatcggcgtataacagtgaagca
gatccatcaagatatgacgaatactacactagtctccaagtgtttgtcgaaaaatcacta
gatgtttataaacctgaattagcaatggttcagtatccattattcattcatatgtattta
gagcttgtctacaaagggtatgaaaaaaatgcccagtcatttttcacgaagttcagagaa
tgccaagaagactaccatgaagaagacctaagacggttatcctcaatcactaggagagaa
cacatggacaaaaatgaattcatgggaacattaaggagcaacaaatttgtaataagaatg
tccagagatacctaccaagtgctgaagaaatacctccaggatactcaacaagaaacactg
ttaactgtcattcaacaacatctacactttgatgtttttgatggaaggccacggcacaag
tcatcaattgatgcaacatcaggaggaattactggtgaagcaacatttgaagcaaacaaa
accaaagttctgtatggtcttcaacctgagccagactttggaatcacaatagaagatgaa
aatgaagaagaggatgataaagataaacccaagaaaaagaagacaaaaaaggaaaatgga
acaggaaggaaaaagtttgaattcaatccaaatgcacctcctctgaacagaataccattc
cctgagttgagagacagtgataaactgagaaaagcacaggttctgagagaaaaggccaaa
agactcaaacttgatgcagaaaccttaccttccatctgtttctacacccagttaaattca
catgaaggaaygatctgtgcaagtatttccgaggatgcaacattgctgagtgctgggttt
gaagacagtataatcagggtttggagtttgactccaagaaagttaagaagcctaaaacca
ccctcagaactgaacaagattgataaagaagctgaggatgtgatggaaagaataatggat
gacaaaacagctacagactgtcgtcgactggttggtcactctggacctgtattcgctgtc
agtatcgtccatgacaatatgtatcttctgtcgtgttccgaggacaagaccattagacta
tggagtctttatacattcactacgctggtctgctacaagggacataactatcctgtctgg
gatgtgcagttttgtccacgcggccattacttcgcatcgtcatcacatgacagaacgatt
agactttggtcaactgaccatcaacagccacttagaatattctctggtcacgtgtctgat
gtcaataaagttgctttccatcccaactgtaactacctggcttctggatcaagtgatcgt
accgtacgactgtgggacattcagacaggcacctcagtacggctttttaccgggcataag
ggaccaattcatgcactggcattctctaggagtggcaggtatcttgtttcctctggtgtt
gacaaacgcatcttagtgtgggacctggctgaaggcaccttaaccacagaactcaaggga
cataaagacactgtttactcgctgtgcttctgcagagacggcaatatactggcatcaggt
ggcttaaataattgtgtaaagctatggaatgctaaagccatttgtaatcctgaagaagac
gaggatgaccctcatggcgagttggataaatcagctgtatatgagttagggtcgtacccc
accaagaacactcctatccattgcctacacttcacctataggaatctattgctagcaact
ggccctttcaactcgatctga
DBGET
integrated database retrieval system
