Actinia tenebrosa (Australian red waratah sea anemone): 116298336
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Entry
116298336 CDS
T07455
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116298336
09124 Replication and repair
03420 Nucleotide excision repair
116298336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116298336
03036 Chromosome and associated proteins [BR:
aten03036
]
116298336
03400 DNA repair and recombination proteins [BR:
aten03400
]
116298336
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116298336
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116298336
Chromosome and associated proteins [BR:
aten03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116298336
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116298336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
Eco57I
nSTAND3
PspAA
Motif
Other DBs
NCBI-GeneID:
116298336
NCBI-ProteinID:
XP_031562643
UniProt:
A0A6P8I441
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKKTLDAKGHCLLEMPSGTGKTVSLLSLIVAYQ
IARPFDLTKLIYCSRTVPEIEKVLEELKVLMEYYEKETGEQPNMLGLALSSRKNLCINPK
VVEEREGKRVDGKCLSLTASYVRLRHKDDSSVPVCPFYEDFDSVGRDEKLPADIYNLDDL
KAYGERKGWCPYFLARYAIYHANIVVYSYHYLLDPKIADLVSKELDKTSVVVFDEAHNID
NVCIDSMSVTITRRTLDRSHANVESLANAIKSIKETDAQKLKEEYNRLVEGLRQASEARD
TDVVLANPVLPDEVLEEAVPGNIRKAEHFVSFMRRFVEYLKTRLRIQHVVQESPQSFLQH
IYQQVCIERKPLRFCAERLSSLLHTLEIPEVQDYGPLTLIANFATLVSTYNKGFCLIIEP
FDDRTPTIPNPILRLSCMDASVAIKPVFDRFQSVVITSGTLSPIDMYPKILDFRPVTMTS
FTMTLARTCLCPMIVSRGSDQVAMTTKFETREDIAVIRNYGNLLAEMSAVVPDGIVCFFT
SYQYMEAVVSIWHDQGIISGIQKNKLLFIETKDASETSLALFNYHKACENGRGAILLSVA
RGKVSEGVDFDHHLGRAVIMFGIPYVYTQSRILKARLEYLRDQFNIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGILVFADKRFSKMDKRGKLPKWIQEYLKDSLCNLSIDEGVQISKRF
LRQMAQPFDQEDQLGLSLLTVEQVQSEEFQKRILQSAMA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaacatcgatggattgttagtttattttccctatgattacatctatcctgag
cagtactcttacatgctagaactcaagaagactctagatgcaaagggtcattgtcttttg
gagatgccttcaggcactgggaaaactgtttctcttttgtctctcatagtggcataccaa
attgcaagaccttttgacctcacaaagttgatttactgttccagaacagtgcctgagatt
gaaaaggtattagaagaactaaaggtacttatggaatattatgagaaagaaactggagaa
caacccaacatgttaggcctggctttgagttcaagaaaaaacctgtgcatcaatcccaag
gttgtggaagaaagggaagggaaaagagtagatggaaagtgtctgtcgctaacagcctct
tatgtcaggctaaggcacaaagatgattcttcagtacctgtctgtccattttatgaggat
ttcgacagtgttggtagggacgaaaagctgcctgcagatatatataacctggatgacttg
aaggcatatggtgaaaggaaaggatggtgtccttattttcttgcgagatatgctatttac
catgctaatattgtggtttacagttaccattatttacttgatcctaaaattgctgacttg
gtgtccaaagaattggacaagacttctgtggttgtatttgatgaggcgcataatatagat
aatgtttgtattgattcaatgagtgtcacaattaccagaagaactttagacagaagccat
gctaatgtggaatctctggctaatgctataaaaagtattaaagaaacagatgcacagaag
ttaaaagaagaatataacagactagttgaaggtttgaggcaagccagtgaagctagggat
acagatgtggttcttgctaatccagttttgcctgatgaagttcttgaagaggcagttccc
gggaatattagaaaagcagagcattttgtcagctttatgagaagatttgtagaatattta
aaaacaagacttcgtattcaacatgttgtacaggagagcccacagtcgtttttacagcac
atttatcagcaagtctgtattgagcgaaaacccttaagattctgtgcagagcggctcagc
tctcttctacatacattagagatacctgaagttcaagactacggccccttgacactcatc
gctaactttgccacacttgtcagtacttacaacaagggtttttgcctgattatcgaacct
tttgatgatcgaacgccaacgattcctaacccgatattacgtcttagttgtatggatgca
tcagtggccatcaaacccgtgtttgatcgattccagtctgttgtcataacttctgggaca
ttatcacctattgacatgtatcccaaaatccttgacttccgtcccgttaccatgacatcg
ttcaccatgaccctggcacgaacctgtttatgtcccatgatcgtcagtcgtggtagtgac
caggtcgctatgacaactaaattcgaaacacgggaggatatagctgtcattcgtaactat
ggtaacctacttgctgagatgtctgctgtagtgcctgatggtatcgtttgcttttttaca
agttatcagtatatggaagccgtggtgtctatttggcatgaccagggtataatcagtggt
atacaaaaaaataaacttcttttcatcgaaacaaaagatgcgtcagaaaccagtctggct
ctatttaactatcataaggcgtgtgagaatggacgtggagctattctactgtccgttgct
cgagggaaagtgtcagaaggggttgattttgatcaccatcttggccgggctgtcatcatg
tttggtattccatatgtctacactcagagcaggatccttaaggctcgtctagagtatctt
cgagatcagttcaatatcagagaaaatgacttccttacattcgacgccatgagacacgcg
gctcagtgtgtgggtcgagccatccgaggtaagacagactatggcatcttggtatttgct
gataagcgattttcgaagatggacaaaagrggaaagcttcctaaatggatacaggaatat
ctaaaggattctctttgcaatctgtccatcgatgaaggagtacagatcagtaagcgattt
ctcaggcaaatggcccaaccattcgatcaggaggatcagcttggattatcgttacttacc
gttgaacaagtacaatctgaagaattccagaaacgaatcttacagtcagcgatggcttga
DBGET
integrated database retrieval system
