Actinia tenebrosa (Australian red waratah sea anemone): 116299351
Help
Entry
116299351 CDS
T07455
Name
(RefSeq) endoribonuclease Dicer-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aten03036
]
116299351
Chromosome and associated proteins [BR:
aten03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116299351
microRNA pathway
RISC loading complex
116299351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dsRBD
Dicer_platform
PAZ
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
116299351
NCBI-ProteinID:
XP_031563857
UniProt:
A0A6P8ID23
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MESKRAAEQSFLRPPFPVDLVETGLRQKKSLLCVAKAKSKFFIAVKLVEEVKRRSSPGKT
ALVLSENIEGDFVKEFSRAVDLQTDLKRISLEDVRNKTASDSLDANVLVTTIQGTVDLFE
SNILSVEKVNLVIIDDCLIENDVVIFDRDEVYFYLPPFLSVIELLTSHEQMPQPIIIGLL
SDLPVSSPEKIESMLPATELAFGCSFSVSSDLVAMNRFGEQPQEKLIKCSVLADEAEKVK
QIFTIVMSTLSNFLLIHEESQLVRIRRQCVLCYKILGHFGCYAAIYHARLIMREISKLKK
KVSELEKPHLLRCETQLQSLLQYSKKDEIPDITPLVKNILTSLSYLKPKSTSGSKTTYLS
TSNENDDTASSFKVASNTNEGRHGDNPVSIILCFLDQEAMVLNLLLNTLAKTNPEMAFLR
SRHISSAMIKPNDMSTDXDTDERINEDIIRLICDGQVNIVVTSPDMENDIYLGQCKQVIR
IGIPQDYLSYVRVKNIPRMAHAQFIILESEDKDNGNSMLRYNAFKQTEGILTTRCSSHQT
VPKPDVLSLDLADCSLNGEDRPCIDANDAIALINRYCKAFPSDGFGCAVPRCREKLIKEK
DQTRVVSKLYLPRHSPVFWSFKGTATIPRKQSKRPATPEELAKARIESKTRAALLACQAL
LDVDEMNDQLEPTIRHTNVSLKKADEKCDGEVADGGQGVEGSAKRRRAYHKKFATVLTKN
LAVAEEPVYVYSITVAVNKLARHEGKVRSYNVPSTDVSSVSLGFLSRNRLPKLPNFVLFS
KAGELKVSITECLSTTTLSPEQLALVQRFHQYVYAHIININGENEEQCFRFDPEEQSFGC
YLVLLSGLSVDPEPSSVKYSSESMKEVKEGTEYDLTLQSCKERTNDESETQRSSTEELGN
TLRADTQDTAHENRAENLTIAFDFLEDLEKQLGDFRNPQHPSVTETRNYEIFRNRVVTAT
YMAKPTSYFVADICYDMTPLSPFPDPSVAATFAEYYKERYDVVLREDQPLLTMDCISKRQ
LNLLSSRYQDTKGKNLALPDKNSKRSQRSKINLIPQLCSIHPISASLWQQMLYIPSIMYR
LECLLVAEELRHTIALQTGIGSIEYPGDDLPLLATGESVGENSTEGLFEESNSERSKQEQ
TEVPKDRPEPSRKKETEVPKDRPDSSRKEQTEVPKDRPEPSKKEETEVPKDRPDSSRKEQ
IEVPKDQPEPSRKEETEVPKDRPEPSRNGQAEVPKNRPGPSATLFLRALTCLGACDVFSH
ERLEMYGDALIKHSVSLNLYHECPFSNVGQISFLRGLHVSNRQLFYLGRALDLPSYICNV
PFKPLVNWHPHGFTALSCAKTQARYLELNAAEQGIDLSDNEDEKSEKDEAACVKPGQAAL
IDGQNHVVVSDKTVADATEAIIGAYLVTCGFNDALRLMKWIGLDVRTKKPQENISSTSTM
STPEYVDEQETSDFDEEFFDNSLRLSKESLDVEFKEIEEVLGYTFRDKLLLLQAFTHASY
PRDFIHVRTSYEHLELLGDAVLDYLITRYLYYTQRTMAPGALTDLRSAVVNSYSFAFLAV
KYGFHRHLRSLSPAVFKLVNKFVVVQDGMMKKEMKENPDQIFSSVFIPMDDEAGEGVEVP
KVLADLFESVIGAVFIDCGQDEEKTWDVVYPLLQATLEHYSIHLPVSPVRQLQEMLPSSV
SLLSMDRSVAGKYTCTLLVQGIGKFKGTGRKPKIARSTAAQRALAHIQSQSGKASTKNT
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaaaagagcagctgagcagtcttttctacgaccaccctttccagttgatttg
gttgaaactggtttgcgccagaaaaagagtttgttatgcgtagcgaaagcaaaaagtaag
tttttcattgctgtcaaacttgttgaagaagttaaaagacgaagctctccagggaaaaca
gctcttgttttatcagaaaatatcgaaggcgattttgttaaagaattctccagagcagtg
gatttacagactgatctcaaaagaataagcttagaagatgtcagaaacaaaacagcttca
gatagtcttgatgctaatgtacttgtaaccactatacaaggcactgttgacctctttgag
tcaaatatattgtctgtagaaaaagtaaatttggtcatcatagatgactgtcttatagaa
aatgacgtagtcatctttgatcgtgatgaggtctatttttatcttccaccttttctcagt
gttattgaacttctaacatcacatgaacaaatgccgcagccaatcataattggtcttttg
tcagatctccctgtctcttctcctgaaaagattgagtccatgctaccagcaacagaattg
gcctttgggtgctctttttcagtatcaagtgatttggtagctatgaacagatttggagaa
caacctcaagaaaaactcataaagtgctctgttctagccgatgaagctgaaaaagttaaa
caaatattcactatcgtaatgtctacacttagtaactttttactaatacatgaagagagc
cagctagtgagaataaggcggcagtgtgtactttgttataagatccttggacactttggt
tgctacgccgccatatatcatgcaagattaatcatgagagaaatctcaaagctgaaaaaa
aaagtcagtgagttagaaaagccacatcttttacgctgtgagacccaactacaatcactg
ttgcagtatagcaagaaggatgaaatacctgatatcactcccctggtgaaaaatattctt
acaagtttgtcatatttgaaacctaagtctacttcaggctcaaaaacaacctatttgtca
actagtaatgaaaatgatgacactgcatcatcttttaaggttgcaagtaacactaatgaa
ggtcgccatggtgataatccagtcagtataattttgtgctttttagatcaagaagccatg
gtattgaacctcctgttaaatacgctggcaaaaaccaatcccgaaatggctttccttcgc
agtcgacatatctcaagtgcaatgatcaaaccgaatgacatgagtacagacwtcgacaca
gatgaaagaatcaatgaagacatcataagacttatttgtgatggacaagttaacattgtg
gtcactagtccagatatggagaatgatatttatcttggacagtgtaaacaagtgataagg
attggcattcctcaagactatctgtcgtatgttagagtcaaaaatataccaaggatggct
catgctcaattcattattcttgaatcagaagacaaggataatgggaatagtatgctgcga
tacaatgcttttaaacagacagaaggtatcttgacaacaagatgttcatcacatcaaact
gtccctaagcctgatgtattgtcattagatctagctgactgttcactgaatggagaagac
aggccctgtattgatgctaatgatgctattgcacttattaacaggtattgcaaagcattt
cctagtgatggtttcggctgtgctgtccctcgatgtcgcgagaagctgatcaaggaaaaa
gatcagacccgtgtcgtatccaagttgtacttacctcgacattctcctgtattctggtcg
ttcaagggtacagcaactattcctagaaaacaatctaaacgaccagctacacctgaggaa
ttggccaaggctcgcattgaaagcaagacgcgtgcagcattactagcctgtcaagcactg
cttgatgtagacgaaatgaacgaccaactggaacctacgataagacacaccaatgtctct
ctaaaaaaagctgatgaaaaatgtgatggtgaagttgctgatggaggtcagggtgttgag
gggtcggcaaagagacgaagagcctatcacaagaagtttgcaaccgtcttgacgaagaac
cttgcagtagctgaagagccagtctacgtgtatagtataacagtggcagtaaataagctc
gctagacatgagggtaaagtacgatcttacaatgtcccatctacagatgtctcaagtgtc
tcactgggttttctatcgagaaatcgacttccgaagctgccaaacttcgtcctcttcagc
aaagccggcgagttaaaggtatcaatcactgaatgcctaagcacaactaccctgagcccc
gaacagttagcactggtccagcggttccaccagtatgtctatgctcacatcattaacatt
aatggagagaatgaagagcaatgctttcgctttgatcctgaagaacaatcctttgggtgc
tatcttgtgctcctcagtgggttatcagtggatccagaaccaagtagtgttaaatacagt
agcgaatcaatgaaggaggtcaaagagggcactgaatatgacttaactttacaaagctgc
aaggaaaggactaatgacgaaagtgaaacccaacgatcctctacagaagagcttgggaat
actttaagagcagacactcaagacaccgcacatgagaacagagctgagaatttaacaatt
gcatttgattttcttgaagacttagaaaaacagcttggagacttcaggaatccccagcac
ccttcagtaacagagacaagaaattatgaaatatttcgaaatcgagttgtcaccgcgact
tacatggccaaaccaacgagttactttgttgcggatatctgytacgacatgactcccttg
tcaccgttcccggatccctcggttgctgctacttttgcggagtattacaaagagaggtat
gatgtagtgctgcgtgaagatcagcctctactcaccatggactgcattagtaagaggcaa
ctgaatttactgtcatctcgttatcaggatactaaagggaaaaaccttgcccttcctgat
aaaaactcaaagaggagtcaaagatcaaagatcaatctgataccacagctttgttcaatc
caccccatatcagcttcgctctggcaacaaatgttgtatatcccatccataatgtaccga
ctggagtgccttctagtcgcggaagagttaagacatactatagcccttcaaacaggaatc
ggaagcattgaatatccaggtgatgaccttcctttgttagctactggagagtcagttgga
gaaaacagtactgaaggcttgtttgaggagagcaattcagaacgaagcaagcaggaacaa
actgaggtgcctaaagaccgaccagagccttccaggaagaaagaaactgaggtgcctaaa
gaccgaccagattcttccaggaaggaacaaactgaggtgcctaaagaccgaccagagcct
tccaagaaggaagaaactgaggtgcctaaagaccgaccagattcttccaggaaggaacaa
attgaggtgcctaaagaccaaccagagccttccaggaaggaagaaactgaggtgccgaaa
gaccgaccagagccttctaggaatggacaagctgaggtgcctaaaaaccgaccaggacct
tctgcgactcttttcctgcgagccttaacttgtcttggcgcttgtgatgtgttctcgcat
gaacgactagagatgtacggagacgcccttatcaaacattctgtttccttgaacttgtac
cacgaatgtcctttctcaaacgtgggtcaaatatcgttcctaagagggctacatgttagt
aacaggcagctgttttaccttgggcgcgcactggacttaccatcatatatctgtaatgta
ccctttaagcctttggtcaattggcatcctcacggatttactgcgctatcgtgtgctaaa
acccaggcgagatatctggaactgaacgctgcagaacaagggattgacttgagtgataat
gaagatgagaaaagtgagaaagacgaagcagcttgtgtgaaacccggacaagcagcattg
attgatggtcagaatcacgtggttgtgtcagacaagactgtagctgatgcaactgaggcg
atcattggtgcgtatttggtcacgtgtggatttaatgatgctcttcggctcatgaaatgg
attggtttagacgtacggactaagaaaccccaagagaacatatcatccacgtcaacgatg
tctacaccagagtatgtagatgagcaagaaacatctgactttgatgaagaattttttgac
aactccttgcgtcttagtaaggaaagcctagatgttgagttcaaagagattgaagaggtc
ttagggtacaccttcagagacaagcttcttctccttcaagcgttcacgcacgcttcttac
ccacgtgacttcattcacgtgcgtacaagctacgaacatcttgaacttcttggagatgcc
gtgttagattatttgattactcgttatttatactacactcagcgaaccatggctcctggt
gctttaacagacctgaggtcagcggttgtcaacagttacagctttgctttcttggcggtc
aagtacggcttccataggcatctgcgatcattatcgccagcggtttttaagctggtgaat
aagtttgtggtcgttcaggatggtatgatgaagaaggagatgaaagaaaatcccgaccag
attttctccagtgtgtttattcccatggatgatgaagcaggagaaggcgttgaggttcct
aaagtcttggcagatctgttcgagtcggtcatcggtgctgtttttattgattgtggtcaa
gatgaagagaagacctgggatgtggtatatcctttgttacaagctactttagagcattat
tccatccacctgcctgtgtcaccagtcagacagctacaggagatgttaccatcatctgtg
tccttactatctatggatcgtagcgtagctggtaaatacacttgtacactgcttgttcaa
ggaattggtaaattcaagggaactggtagaaaacccaagattgcaaggtcaacagccgcc
caacgagcactggctcatatacagtcacaaagtggaaaagcgtccactaaaaacacatag
DBGET
integrated database retrieval system
