Actinia tenebrosa (Australian red waratah sea anemone): 116300585
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Entry
116300585 CDS
T07455
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116300585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116300585
03041 Spliceosome [BR:
aten03041
]
116300585
03036 Chromosome and associated proteins [BR:
aten03036
]
116300585
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116300585
Spliceosome [BR:
aten03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
116300585
Complex B
116300585
Complex C
U2 SnRNP specific factors
116300585
Chromosome and associated proteins [BR:
aten03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
116300585
TFTC complex
116300585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
116300585
NCBI-ProteinID:
XP_031565334
UniProt:
A0A6P8I9Q4
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MHMYALTLQRATAINSSIYGNFSGTKQQEIIVSRGKSLELLRADPNTGKVFPVLAVEMFG
IVRDLISFRLTGGSKDYIVVGSDSGRIVILEYIPSKNVFEKVHQETFGKSGCRRIVPGQY
LAVDPKGRAIMIGAIEKQKLVYIMNRDSSARLTISSPLEAHKSHTLVYHTVGVDVGFENP
MFACLEIDYEEADTDPTGEAAQTTPQTLTFYELDLGLNHVVRKYSEPLEEHGNLLIAVPG
GSDGPSGVLVCSENYITYKNFGDQPDIRMPIPRRKHDLDDPERGMIFVCSATHKTKSMFF
FLIQTEQGDIFKVTMETDEDMVTEIRMKYFDTVPVATSMCVLKTGFLFTASEFGNHYLYQ
IAHLGDDDEEVEFSSTTELEEGTTFFFTPRGLKNLVLVDEIESLAPIMSCQIADLANEDT
PQLFTLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKHTSSDEFDAYIVVSFIN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGEDALLQIYPDGIRHIRADKRVNEWKTPG
KKAIVRCAVNQRQVVIALTGGEVVYFEMDQSGQLNEYTERKEMSSDVQCMALGPILHGEL
RSRFLAIGLSDNTVRIISLDPQDCLTPLSMQALPATPESLCIVEMGGVEGEAEGASLGGL
FLSIGLSNGVLLRTVLDNVTGDLSDTRTRYIGSKPVKLFKVQMHGMDSVLAMSSRSWLSY
THQSRVHLTPLSYESLEHASGFASEQCPEGIVAISSNTLRILALEKLGAVFNQVATPLRY
TPRKFVIHSPSSSLIIIETDHNAYTDTSKDEKKQQLAEERVEMAGDEEKEMAAQMAAEFL
NEDLSEQQFGSPKAGNGMWASVMRVLDPIKGETMDLVQLEQNEAVISVCVLSFSCRPEES
FVIVGTAKDMTLNPRSCAAGYLHAYRMVEQPDGTYKLEFQHKTEVDDIPGALEPFQGRLL
VGIGRLLRVYDLGKKKMLRKCENKKLPNFIVEIKSMGTRIAVSDVQDSVHLVKYKPRDNH
LVIFADDVNPRWVTCCCFLDYSTLAVADKFGNIGVVRLSAGSSDDVEEDPTGNKAFWDRG
LLNGAQQKLEALCNYYVGETVLSLQKATLIPGGSESLVYTTLSGGIGMLVPFASREDIDF
FQHLEMHLRSEHPSLVGRDHLSFRSYYFPVKNVMDGDLCESYNSLEYNKRRAIAEELDRT
PAEVSKKLEDIRTRFAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgtacgctcttacccttcaacgcgctacagccatcaactcatccatctatggt
aacttttctggtaccaaacaacaagaaatcattgtttcaagaggaaaatcacttgagttg
ctcagagccgatccaaatacaggcaaagtttttcctgttcttgctgtggagatgtttggt
attgtacgggatttgatatcctttagactaactgggggctccaaagattatattgttgtt
ggaagtgattctggcaggattgtcattcttgaatacattccatcaaaaaatgtttttgaa
aaggtgcaccaagagacatttggaaaaagtggatgtagaaggattgtacctggacagtac
ctggccgttgaccctaaagggcgagcaataatgattggtgccattgaaaagcaaaagctc
gtatacatcatgaacagagattcgtcggcacgtctgaccatttcttcacctctagaggct
cacaaatcacacactctagtctatcacactgttggagtagatgttggatttgagaaccca
atgtttgcctgtctagaaatagactatgaggaagctgatacagatccaactggtgaagca
gcacagacaacacctcagacattaacattttatgaacttgacctgggactgaatcatgtc
gttaggaaatacagtgaacctttagaagaacatggcaacttgcttattgcagtacccggt
ggcagtgatggtcccagtggagtcttggtctgctctgaaaattacataacttacaagaac
tttggagatcagcctgatatcagaatgcctattccaagaagaaagcatgaccttgacgac
cccgaacgaggaatgatatttgtttgcagtgctacacacaagaccaagtcaatgtttttc
tttttgatccaaaccgagcaaggagacatcttcaaagtcaccatggaaacggatgaggac
atggtaacagaaatccgcatgaagtattttgacactgtaccagttgctactagtatgtgt
gtcctgaagactggctttctctttacagcgtcagagtttggaaatcactatctgtaccag
attgctcatctgggtgatgatgatgaagaggttgagttttccagcacaacggagctggag
gagggaacaactttcttttttactcctcgaggactcaagaatcttgtcctggttgatgag
atagaaagtctagccccaatcatgtcttgtcaaattgctgatcttgcaaatgaagatact
ccacaattattcactctctgtgggcgtggcccaaggtcatctttacgtgtactccgccat
ggtctagaggtatctgaaatggctgtgtccgagttgccaggcaaccctaatgctgtgtgg
actgtaaaacacaccagctcagatgagtttgatgcctacattgtagtgtctttcattaac
gctaccttggtactgtccatcggcgagacagtagaggaagtaacagacagtggattcctt
ggaaccacacccacattgtcctgctctcagctcggcgaagatgcactattacagatctac
cctgatggaattcgccacattagagcagacaagcgtgtgaatgagtggaagacacctggt
aagaaagccattgtaaggtgtgccgtaaatcagcgacaggttgttattgcccttaccgga
ggagaggtggtctattttgaaatggaccaatcaggacagttgaatgaatacactgaacgt
aaagagatgtcatcggatgtacaatgcatggctttggggccaatacttcatggagaattg
agatcaaggtttctggccattggtctcagtgataatacagtcaggatcatatcccttgat
ccacaggactgtctgacaccactcagtatgcaagctctgccagcaacaccagaatctctg
tgtattgtagagatgggaggagtagagggagaagctgaaggtgcaagtcttggagggctg
ttccttagcattggattatcgaatggagtacttctgcgaacagtgcttgataacgtgaca
ggagatttgtctgatacaagaacaagatatattggttccaaacctgttaaactgttcaag
gttcagatgcatggcatggactcagttctcgctatgtccagtcgatcatggctgagctat
acccatcaaagccgtgttcatttaacacctctttcatacgaatcccttgagcatgcatca
ggatttgcttctgaacagtgtcccgaaggaatcgttgccatatcatccaacactctcaga
attttagctttagaaaaactgggtgcggttttcaaccaagtggccacacccctgaggtac
acccctcgaaagttcgtaatccattcacctagcagcagcctgatcatcatagaaacggat
cataacgcatatactgatacttctaaggatgagaaaaagcagcagttggctgaggaaagg
gtagaaatggctggtgatgaagagaaggaaatggcggcacagatggcagctgagttcttg
aacgaggatttgtcagagcagcagtttggttcacctaaagctggaaatggaatgtgggca
tctgttatgcgagtgcttgatcctattaagggagaaacaatggacttggtacaacttgaa
cagaatgaagcagtgatcagtgtgtgcgtgttatcgttcagctgtcgaccagaagaatca
ttcgttatcgttggaacagctaaggacatgactctgaaccctcgttcgtgtgcggctgga
tacctacatgcctacagaatggtcgagcaacctgatggcacttataaactggagtttcaa
cacaagactgaagtagatgacatacctggtgccctcgaacctttccagggtcgactgtta
gttggaattggtcgtctgcttcgagtttatgaccttggcaagaaaaaaatgcttaggaaa
tgcgaaaataagaaactgcccaactttatagtggagatcaaaagcatgggtacgcgtatt
gcagtcagtgacgtgcaggactctgtacacctagtcaagtataaacccagagacaaccac
ctcgttattttcgctgatgacgtcaatcccaggtgggttacctgttgctgtttccttgac
tacagtactttagccgttgctgacaaatttgggaacatcggagtggttcgattatcggca
ggctcaagtgatgatgttgaagaagatcccacgggaaataaggcattctgggatcgcggc
ttgcttaatggcgcacagcaaaagttggaggccctgtgtaattattatgttggcgagact
gttctgtctctacaaaaagctaccctaattccaggggggtccgaatctctcgtttacact
acactatcaggggggatcggtatgctggtaccatttgcatcacgagaggatatcgatttc
ttccagcatcttgaaatgcatttgagatcagagcatccatctttagttggtcgagatcat
ctgtcattcaggtcttactactttcccgtcaagaacgtgatggacggtgacctttgcgaa
agttataactctttggaatataacaaacgacgggcaatagccgaggaactggatcgaaca
ccagcagaggtgtccaaaaagcttgaagacatcagaacacgattcgcattttag
DBGET
integrated database retrieval system
