Actinia tenebrosa (Australian red waratah sea anemone): 116300693
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Entry
116300693 CDS
T07455
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116300693
09124 Replication and repair
03420 Nucleotide excision repair
116300693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116300693
03400 DNA repair and recombination proteins [BR:
aten03400
]
116300693
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116300693
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116300693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
MDFI
Motif
Other DBs
NCBI-GeneID:
116300693
NCBI-ProteinID:
XP_031565469
UniProt:
A0A6P8IFE8
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MAASPEWGSQYFRHLQLKDLDDYLCDLPVTTLDRLYNHPATCMTVFRELPELARHYVLRT
LFTDQPIPESLFTTWIKKDYYNHHVGSVKKLKALRIWKETTAGGPNRCEMNSTFQYNLKM
AICGGGRPWIDSATTLEPDKRNREPDFLDKYATERWETVLYFMTGSYDNSETGVSQDVIR
ILVLSGLMKCESPGSSPVISPAGFQFLLMDRSSQVWYFMLQYLETVEARGMDLVECLSFL
FQLSFSTPGKDYPTDGLTECQLKMLQHLREIGLVFQRKRTSKRYYPTKLAVDFTFSSSEK
SSQLSKTQDGFIVIETNYRVYAYTDSSLQVALVGLFCEILCRFPNLCVAVLTRESCHQAL
SSGISAEQILHFLQTRAHPEMQKKTPIIPPTISDQVRLWEMERSRMKFTEGVLYNQFLSQ
DDFDTLRKYAEDLGVLIWANSLKRVVVVSRSGHDDVKRFWKRHKT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcccggagtggggaagtcagtattttcgccatttacaactaaaagattta
gatgattatctatgtgatcttcctgttactacattagatagactctataaccatccagct
acttgtatgacggtttttagggaacttcctgaattagcaagacactatgtattgagaacc
ctttttactgatcagcctataccagaaagtctttttactacatggataaaaaaagactac
tacaatcatcatgttgggtctgtcaagaaacttaaggcactgagaatatggaaagagacc
acagcaggtggaccaaatagatgtgaaatgaattccacatttcaatacaaccttaaaatg
gctatctgtggagggggaagaccatggattgattccgcaacaactcttgaacctgacaag
aggaatagagaaccagattttctagataaatatgctactgaaagatgggagacagtgctg
tactttatgactggttcttatgataacagcgaaacaggtgtaagtcaagatgtcattagg
attctcgtacttagtggtctcatgaaatgcgagtctcctgggtctagtcctgtcataagc
cctgctggatttcaatttcttctcatggatagaagttcacaagtctggtatttcatgtta
caatacttagagacagttgaggcacgtggtatggacttggttgagtgtttgtctttctta
tttcaattaagtttttcaactcctggaaaggattaccctactgatggactaacagaatgt
cagttgaaaatgctgcagcacctgagagagataggtttagttttccagagaaagcgcaca
tcaaagaggtattatccaaccaaattagctgttgactttacattttcaagttcagaaaaa
tcaagtcaactaagtaaaacacaagatggttttattgttatagaaacaaattatcgtgtc
tatgcatatacagattcttcccttcaagtagctttagtaggattgttttgtgaaatatta
tgcaggtttccaaacttatgtgtggctgtcctaaccagagaaagttgtcatcaagctctt
tctagtggcatttcagcagagcagattcttcactttcttcaaacacgagctcatccagaa
atgcaaaaaaagactcccattattccacccacaatcagtgatcaagtcagactctgggag
atggagagaagcagaatgaagtttactgaaggagtactttacaaccagtttttatctcaa
gatgactttgacacgttaagaaaatatgcagaggatcttggtgtgctcatttgggcaaac
tctttgaaaagggttgtcgttgtcagtcgctctggacatgatgatgtaaaacggttctgg
aaaagacacaagacctaa
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