Actinia tenebrosa (Australian red waratah sea anemone): 116300879
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Entry
116300879 CDS
T07455
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116300879
09124 Replication and repair
03420 Nucleotide excision repair
116300879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116300879
03400 DNA repair and recombination proteins [BR:
aten03400
]
116300879
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116300879
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116300879
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116300879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
116300879
NCBI-ProteinID:
XP_031565707
UniProt:
A0A6P8IG39
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MKPQKRKRDEASNSKKSKKGKTQVEEEEYEFEDEEESLTEEGECIPKSSGAALKSENQED
EFGARDYRQQIELKPDHSSRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIH
EYRLTAYSLYAAVSVGLQTSDIIEYLRRLSKTTIPDGIEKFIKLCTLSYGKVKLVLKRNQ
YFVESNHPEVLQTLLRBEVIQSCRIIPEEGDAPEVSEILKSTDKGRSAIKFNSKQKENNT
ADSSKAQDSSQEPGEQEKTAIPSDITDYIDKIDQDEEDEEESQIFSFEIRQEQIEILQRR
CIDLDYPLLAEYDFKNDTVNADLNMDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCG
AGKTLVGVTAACTVRKPCLILCTSGVAVEQWRSQFKLWSTVDSRIICCFTSDAKDKPKDC
GIAISTYSMVSHTGKRSWEAEQVMSFLQAQEWGLMILDEVHTIPAKQFRRVLTVVQAHCK
LGLTATLVREDDKIQDLNFLIGPKLYEANWMELQNNGFIARVQCAEVWCPMTPEFYSEYL
AIRTRKRKLLYVMNPNKFRSCEFLIRYHERRNDKVIVFSDNVFALKNYAVKLGKPFIYGP
TSQAERINILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQVSSHGGSRRQEAQRLGRI
LRAKKDMAAEEYNAFFYTLVSTDTEEMYYSSKRQRFLVNQGYSFKVITSLAGMDEENLNL
STKREQQELLQKVLAASDADAEEEKNAGDPNQKSSGVIRRAGSMASMSGADDMMYLEYRS
SSRSSSNLARHPLFKRFRK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaaagcgaaagcgagacgaagcatcaaattctaaaaaatctaagaaagga
aaaacccaggtagaagaggaggaatatgaatttgaagatgaggaggaatcattaactgaa
gaaggtgaatgtattccaaaatcatctggagctgctttgaaatccgaaaatcaagaggat
gaatttggtgcaagagactacagacagcagatcgaactcaagccagaccattcctcaaga
cctctctgggtggcacctgatggacacatatttttggaatccttttctcctgtctacaag
catgcacatgatttcttaatagccatatcagagcctgtttgccgaccagaacacatacac
gaatacagactaactgcatattccctgtatgctgctgtctcagttggcctccagactagt
gatattatagaatacttgagaaggctgagcaagacaaccattcctgatggaattgaaaaa
tttataaagttgtgtacccttagctatggtaaagtcaaactggttcttaaacgcaaccaa
tattttgtagaaagcaaccatccggaggtactccagaccctgttaagaratgaggtgatt
cagtcatgtaggataatcccagaggaaggtgatgcacctgaagtcagtgaaatactaaaa
tcaacagataaaggaaggtctgctatcaagtttaattctaagcagaaagaaaacaacaca
gcagattcttccaaagctcaagactcttcacaggaaccgggagaacaagagaaaacagct
atcccttctgatatcactgactacatagataagattgaccaagatgaagaagatgaggaa
gagagtcaaatattttcctttgaaataagacaagaacaaatcgagattttacaaagaagg
tgtattgatttggactacccgttacttgccgagtatgacttcaagaatgacacagttaat
gctgatttgaatatggatttgaagccaacaactgttctacgaccatatcaggaaaagagc
ctaagaaagatgtttggcaatggacgagcgcgttctggagttatcgtgttaccgtgtggt
gctggtaaaactctagttggtgtgactgctgcatgtactgtgaggaaaccatgtctcatc
ctctgcacgtcaggtgtcgctgttgagcaatggcgtagtcagttcaagctttggtccact
gttgatagtcgaatcatatgttgtttcacatctgatgctaaagacaaaccaaaagattgt
gggatagctatttctacgtattcaatggtgtctcatactggaaaaagatcgtgggaagca
gaacaggtgatgagttttctgcaagcacaagaatggggtttaatgattctagatgaggta
cataccattcctgctaaacagttcagaagagttctaacagtcgttcaagcccactgcaaa
cttggtctcacggcgactttagtgagagaagacgataagattcaggacttgaatttcttg
atcggaccaaagttgtacgaagcaaactggatggagctacaaaacaatgggtttattgct
agagtccagtgtgctgaggtgtggtgtccaatgactccagagttttacagtgaatatctg
gccattagaacaagaaaacgaaagctgctttatgtcatgaacccaaataagttccgaagc
tgtgaattcctaattcggtatcacgaacggcgtaacgacaaggtgatagtgttttcagac
aacgtgtttgctctgaagaactacgctgtaaagctcggcaaaccctttatttatggaccc
acctcgcaagccgaaagaatcaacattctacaaaacttccaacataatcctttagtcaat
accatatttatatccaaggtcggagataactcgtttgatcttccagaagccaacgtgcta
attcaggtttcttcccatgggggatcaagaagacaggaagctcaacgattggggcgtatt
ttgcgtgctaaaaaagatatggctgcagaagagtacaacgcattcttttataccttagta
tcaacggataccgaagagatgtattattcaagcaaacgtcaaaggttcctggtaaaccag
ggatatagtttcaaggtcatcactagtctggctggtatggacgaggaaaaccttaatctt
tctacgaaacgagaacagcaagaattacttcaaaaggtgttggcggctagtgatgcagat
gctgaagaagaaaaaaatgctggagacccgaatcaaaagtcatctggagtgattcgtcgg
gctggttccatggcgtccatgtcaggtgctgatgacatgatgtatctcgagtaccgatca
tcttccagatcatcgtccaatcttgctaggcacccgttgttcaagagatttagaaaatag
DBGET
integrated database retrieval system
