Actinia tenebrosa (Australian red waratah sea anemone): 116301399
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Entry
116301399 CDS
T07455
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116301399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116301399
03019 Messenger RNA biogenesis [BR:
aten03019
]
116301399
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116301399
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116301399
U7-dependent histone pre-mRNA processing factors
116301399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF7928
Motif
Other DBs
NCBI-GeneID:
116301399
NCBI-ProteinID:
XP_031566314
UniProt:
A0A6P8IHX2
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAASVKRKAEGTVPAEESDLLRITPLGAGQEVGRSCHFLEFKGKKVLLDCGIHPGMMGVE
SLPFLDEIDTAEIDLLLISHFHLDHCGALPWLLEKTTFKGRVFMTHATKAIYRWLLSDYV
KVSNIAAEDMLYTESDLEKSMDKIETIHFHQEKEVGGIKFWCYHAGHVLGAAMFMIEIAG
VKILYTGDFSRQEDRHLMAAEIPTISPDILIVEATYGTHIHEKREERETRFTGTVHDIVN
RGGRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASQLAKKCMSVFQTYVNAMND
KIKKQIAISNPFVFKHISNLKSIDQFDDIGPSVVMASPGMMQSGLSRELFEQWCTDRRNG
VIIAGYCVEGTLAKNLMSEPEEVTTMTGQKIQRKCSVDYISFSAHTDYEQTSEFIRTLKP
PNIILVHGEKNEMGRLKAALIREYEDDSELSIVVHNPPNCQSVELYFRGEKMAKVMGQMA
REKPEHNKQMSGILIKRGFNYHLIAPDDLQNYTELATSVLTQKQSVAFHGSFPVLKHCLE
NLAGRLDDLTLQGKQGVRVFGAITVIQEKSSVVIEWMANSVNDMYADAVLAVILQVESNP
MAAQAASQLKKIDVNTFHEKLITILQGTYGVEYVKLSALGDEIIVTFDDHKAVINLDTLD
VDCSDESLNHHVTHVVKRLHSAFTPCYS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgtgaagagaaaagccgaaggaacagttcctgctgaagagagtgatttg
ctcagaataacaccactaggagctggtcaagaggtcggaagatcatgtcattttctggaa
ttcaaaggcaaaaaagttcttctggattgtggtatccaccctgggatgatgggagttgag
tcactrcccttcctggatgagattgatacagcagaaatagatcttcttcttattagtcac
ttccatcttgatcactgtggtgcactgccatggcttcttgaaaagacaacattcaaggga
cgagtgttcatgacacatgccacaaaagctatttacaggtggctgctatcagattatgta
aaagtcagtaatattgctgctgaagatatgctgtatactgagtctgatttggaaaagagc
atggayaagatagaaacaattcactttcaccaagaaaaagaagttggtggtataaagttc
tggtgctaccatgctgggcatgttctgggagcagctatgttyatgattgaaatagcagga
gttaagattttgtacacaggtgatttctcaagacaagaagacagacatcttatggcygct
gaaataccaactatatctccagatatccttattgttgaagcaacatatggaacacatatt
catgaaaagcgtgaagaaagagaaactcgctttacaggtactgtacatgatattgtcaat
cgcggtggtcggtgcttgattcctgtctttgcccttggccgtgctcaggaacttctcctt
attcttgatgaatactggcagaaccatccagagctgcaygacatcccaatatattatgct
tcacagctcgccaagaagtgcatgtcagtcttccagacttatgttaatgcaatgaatgac
aaaatcaagaaacagatagccatttccaacccatttgtgttcaagcacatttcaaattta
aagagcattgatcaatttgatgacatcgggccatcagttgtcatggcaagcccaggaatg
atgcagagtggcctatcacgtgagctatttgaacaatggtgcacggatcgacgtaacggt
gtcattattgctggttactgtgtggagggaacactagcaaagaatttgatgtctgagcct
gaagaggtcacgaccatgacaggacagaagatacagagaaaatgttctgtggattacatc
tcgttttccgcgcacacggactatgaacagaccagtgaattcattagaacactcaagcca
ccaaacattatcctcgttcacggtgagaaaaacgaaatggggcggttgaaggctgcgctt
attcgagagtatgaagatgattctgagctcagtattgtagttcacaatccaccaaactgt
caragtgtggaactttacttcagaggagaaaaaatggccaaggtaatgggtcagatggcg
agagagaagcccgaacacaataaacagatgtcaggaatcctcataaagagaggtttcaac
tatcacctgatcgctcctgatgacttacaaaattacacagaactcgcaactagtgtatta
acccagaaacaatccgtggcgtttcatggttctttcccagttctaaagcattgccttgag
aacctggcaggtcgtttagatgaccttaccttgcaaggcaaacaaggagtccgtgttttt
ggtgccatcactgttatacaggaaaaaagcagtgtcgttatcgagtggatggccaactct
gttaatgatatgtatgctgatgctgtcttggctgtcattcttcaagtcgagtcaaaccct
atggctgcacaagccgcttcacagttaaaaaagattgatgtaaacacatttcacgaaaaa
ctcatcactattctacaaggtacatatggagtagagtacgttaaactatctgctctcggt
gatgaaatcatagtgacatttgatgaccataaagcagtaatcaaccttgacacattggat
gtagattgtagcgatgaaagtttaaaccatcatgtaacacatgtagtaaaacgtctccat
tctgcgttcacgccgtgttacagctag
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integrated database retrieval system
