Actinia tenebrosa (Australian red waratah sea anemone): 116302828
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Entry
116302828 CDS
T07455
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116302828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116302828
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116302828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
UPF0508_C
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
116302828
NCBI-ProteinID:
XP_031568078
UniProt:
A0A6P8INX9
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAKRGAGSELNRDNWDDDDEIEEAGTFTIASEEDLNKRKIIRARRRIPSDANSKSSGVFQ
KFKGFSGFSGLSGSSSTTDASKSLPGFGSWGSTTSKTETTTATTIAGFTGFAGLSATNSI
SSSSKDSSIASSWSTFNGNKDSEKTETLDDTPNNAYLENIKALNIGVLAWIKKHVEENPY
VDLMPVFKDYRKHMDDLESKATPNKDSPGIKPLPSITPPSSSGSKVVSSNEQQVSSKSLD
FKSSVVPEVRNEEKPFAGLAAAAMASKDNGNDKAENEDEPSDEPPKLKSVITAEEGSQFS
VRCKLFFKRNNAWSELGVGMLNLKDKDDKSQLLVRADTATGKILLNIFIAPSMPVTRSGK
NNVMLVSIPNPPLYSKPSEGDNEKPATYLIRVKTAESADDLFKKLEERK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgaggtgcaggcagcgaactgaacagagataactgggacgacgacgacgaa
atagaggaggccggaacgttcactatagccagtgaagaagatctaaataagcgcaagatc
atcagggctcgaagaagaataccatcggatgcaaattctaagtcttcaggagtcttccaa
aagtttaaaggtttttcgggattttctggtttgtctggctcatcaagtactacagacgct
agcaaatctttaccaggattcggttcttggggatccactacatctaaaacagaaacaacg
acagcaacaactattgctggattcacaggatttgctggtctatctgctaccaacagcata
tcatcttcttctaaggactcatcgatagcatcatcatggtcaacattcaatggaaacaaa
gattctgaaaagacagaaactttagatgatacaccgaataatgcctatcttgaaaatatc
aaagccttgaatatcggtgttctagcctggatcaagaaacatgtagaggaaaatccatat
gttgatttaatgccagtttttaaagattaccgcaagcacatggacgacttagaaagtaaa
gcaacgccaaacaaggattccccaggtattaagccattgccgtccataacgccgccatcg
tcatctggtagcaaagtggttagctcaaatgaacagcaagttagtagtaagagcttggac
tttaagtcttctgttgttcctgaagtaaggaatgaagagaagccctttgctggtcttgct
gcagctgccatggcgtcaaaagataatggaaatgataaagcagagaatgaagatgaacct
agtgatgaacctccaaagctaaaaagtgtcattactgctgaagagggatcccagttctct
gtgcgatgcaaactattctttaagcgcaacaacgcctggtctgaacttggcgttggcatg
ctaaacctcaaagacaaagatgataaatcccagcttcttgtacgtgccgacactgcaaca
ggcaaaatattgcttaacatattcattgcaccctcaatgccagtgacgcggagtggcaaa
aacaatgtgatgttggtctcgatacccaaccctcccctgtactctaagccgagcgaagga
gataatgagaagccagctacatatttgataagagttaagacagctgaaagtgcagatgac
ctttttaagaagctggaggaaagaaaatga
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