Actinia tenebrosa (Australian red waratah sea anemone): 116303536
Help
Entry
116303536 CDS
T07455
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116303536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116303536
03036 Chromosome and associated proteins [BR:
aten03036
]
116303536
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116303536
Coactivators
SAGA/TFTC/STAGA complex
116303536
Chromosome and associated proteins [BR:
aten03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116303536
STAGA complex
116303536
TFTC complex
116303536
SAGA complex
116303536
SLIK complex
116303536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_like
WD_LRWD1
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_HPS5
DUF7165
Motif
Other DBs
NCBI-GeneID:
116303536
NCBI-ProteinID:
XP_031568953
UniProt:
A0A6P8IRS6
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MNPHGNSLKSDQLSSIVMSFLKKRKFTDGEDSTGKHQARGTKHKVEDVALKTSVKSECGI
PNVLSFSVNHLDANNYDEQYGSLKSFITGANPAYRQELVKLLFPVFAHSYLDLIAKGFLN
NAQNFFSKYSSDLMADFKEDIQNLQAITDSERLKSSDTAANFRRSKYLIKLSHKVFTYLM
QYLRSSEHLLLLQLINRNLAIEISQSKPGKNIGSNGNEEEKDTGVNQKVSKETKHSKTVV
EKDDASLKALKESIDKIRNGPACLPSICFYTFQNAYQGLSSVGICNDGSLLSGGFEDSSV
HLWSLIPKKLIKPKTKTCDISKIMLASDTAVANGGKVETVLGEDFPLLGHCGPVYATCFT
PDNTALLSASEDTTVRLWNLHSYSNAVIYKGHNYPVWCLDTSPQSYYFASGSHDCTARLW
NIEYNYPLRIFAGHLQDVDSVKFHPNCSYIATGSTDRTCRLWDIQAGNCVRLFRGHKGSI
LTLGISPDGQYLISSGEDRRIRVWDLTAGNLLKELRGHTDSVHSVCFSSDGTLLVTGGMD
CHVRVWDFHQVSKCASSAASAQSSSELLASFSTKNASVHSVRFSSGNLVLAAGTNAT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccatggaaatagtttaaaatccgaccaactgtcttccatagttatgagtttt
ttgaagaaaagaaagtttacagacggtgaagattcgactggaaagcatcaagcgcgtgga
acaaaacacaaggttgaagacgttgctttgaagacttcggtcaaaagcgagtgtggtatt
ccaaacgtcttgtcctttagtgttaatcacttggacgcaaacaactacgacgaacaatat
ggtagcctaaaatcattcatcactggagcaaacccagcttatcgtcaagaacttgtcaaa
cttctattccctgtgtttgctcattcttatctcgatctcattgcaaagggtttcttaaat
aacgctcaaaacttcttctctaaatacagcagtgacttgatggcagattttaaagaagat
attcaaaatctacaggcgattacggattccgaaaggttaaaatccagcgatactgctgcg
aacttcagacgtagtaaatacttgataaagttgagtcacaaagtcttcacttatttgatg
caatatctgagaagcagtgaacatctattactgctacaactcataaacagaaatcttgca
attgagatatcgcaatctaagcctggtaaaaatattggttctaatggcaatgaagaagaa
aaggatactggtgtcaatcagaaggtttccaaggaaactaaacattcaaaaactgtggtt
gaaaaagatgatgcttctttaaaagctcttaaagagagtatcgataagataagaaatggt
cctgcctgcttgccgtctatttgtttctataccttccagaatgcctatcaaggtcttagt
tctgtaggtatatgtaatgatggaagtctgttgtctggaggttttgaagactcttcagtt
cacctgtggagtttgattccaaaaaagctcatcaaaccaaaaaccaagacctgtgacatt
tcaaaaatcatgcttgcctcagacactgctgttgcaaacggtgggaaagttgaaactgtt
ttgggtgaagattttcctcttttaggtcactgtggacctgtttatgcaacatgctttact
ccagacaatacagccttgttatctgcatcagaagacactacagtacgtttatggaacctg
cattcgtactctaacgcggtcatatacaagggacacaattatcccgtctggtgtctggac
actagtccccagtcttactacttcgcaagtggatcacatgactgcacggcaagactgtgg
aacatcgagtataattatcctctgcgaatctttgcaggtcatctacaggatgtagacagc
gtcaagttccatccaaactgcagctacattgctacaggatctacagacagaacctgtaga
ttatgggatatccaggcaggcaactgtgtgcgactcttcagaggacacaagggaagtatc
ctgaccttaggcatatcaccagatggccagtacctcatatcgtcaggcgaagacaggcgc
attcgagtatgggaccttaccgctggcaacctccttaaagaactacgcgggcacaccgac
tcggttcacagcgtctgtttcagctccgatggaactcttctcgtcacgggaggaatggat
tgtcacgtgcgcgtctgggattttcatcaagtttccaagtgcgcatcaagtgctgcgtca
gcacaatctagtagcgaacttttagcttcgttttctactaaaaatgcatccgtacatagc
gtaagatttagctctggtaatctggtattagctgcaggcactaacgcaacgtga
DBGET
integrated database retrieval system
