Actinia tenebrosa (Australian red waratah sea anemone): 116303697
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Entry
116303697 CDS
T07455
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116303697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116303697
Spliceosome [BR:
aten03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116303697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_Aladin
PRP4
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_like
Beta-prop_VPS8
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
116303697
NCBI-ProteinID:
XP_031569148
UniProt:
A0A6P8ISD1
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSEDDNDAPKAKKQRIYFGSLEEIERERLSKASAPKTESSTSTSADGKRKENGMSDAILA
GIQAGNINISEGEYQDLSEDNTIERHKELLAEFEKRKKARLITVPTDIASVKARLREIRQ
PITLFGEGALERRERLRAILSEFGEDIITTEDKQQREEIPQETEEVWYHEGPDELRIARI
WIANYSLPRACQRLKQARIMQARPDPEKAAKTQELHRKLRSLNNLCSQIGDERPLSFCQF
SPDSKILATASWSGLCKLWSVPNCEPISILKGHNERVGAIVFHPQATLSLDETGPCMASC
SADGAVKLWSLKSDTPIANIEGHEKRVPRLAYHPSGRFLGTCCFDNSWRLWDLEQLKEVL
HQEGHSREVYSIAFQTDGSLSATCGLDARGLVWDLRTGQCVMSLDGHLQKVLAIDFAPNG
YQIATGSEDQKVMIWDLRQHKCLYTIPAHTNLVSHLKYHDDYLLSASYDSHIKVWSHPGW
APLKTLAGHEQKVSCVDLSPDGQYIASTSFDRTFKLWSAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggacgacaatgatgctcctaaagcaaaaaaacaacgcatttactttggaagt
ttagaagaaatcgagagagaacgtttgtcgaaggcaagcgcgccaaagacggagagctct
acaagcacttcagcggatggtaaaagaaaagaaaatggaatgtctgatgctattcttgcg
ggtattcaagccgggaatattaatattagcgaaggagaatatcaagatctttcagaggac
aataccattgaacggcacaaagaactactagctgagtttgaaaaaagaaaaaaggctcgt
ttgataacagtacctacagatattgcttccgtgaaagctaggctacgagaaataagacaa
ccaattactttatttggagaaggagccctagaaagaagagaaagattgcgtgcaatactt
tcagaatttggtgaagatattattacaacagaagataaacaacaacgggaagaaatacca
caagaaactgaagaagtttggtaccatgagggacctgatgaattaaggattgcaaggata
tggatagctaattattccctaccaagagcatgccagagattaaaacaagcaagaataatg
caagccagaccagacccagagaaagcagcaaaaacacaagaactacatcgaaaactaagg
tctttaaataacttatgcagtcagattggagatgagaggcctctttcattctgtcagttt
tcaccagattcaaagattttagccactgcatcttggagtggtttgtgcaagctttggtca
gtcccaaattgtgaacccatttcaattttaaaaggtcataatgaacgtgttggtgcaata
gtgttccatcctcaagcaacattatctcttgacgaaactggtccatgcatggcatcctgc
tctgcagatggagctgttaaactatggtcccttaaatcagatacacctatagcgaatatc
gaaggtcatgaaaaaagagtaccacgtctggcataccatccctctggacgctttcttggc
acatgttgttttgataactcatggcgattatgggatctagaacaattaaaggaagtctta
catcaggaaggacacagtagagaggtttatagcatagctttccaaacagatggatcattg
tcggcaacttgtggacttgatgcacgtggtctggtatgggacttgcgcacaggacagtgt
gtcatgtcacttgatggtcatctgcagaaggtcttagctattgattttgcacctaatgga
tatcaaattgcaacaggaagtgaggaccaaaaagtaatgatatgggatctacggcaacac
aaatgtctctatactataccagcacacactaaccttgtatcacatctgaaataccatgac
gattacttgctatcagcatcttatgacagtcacataaaggtgtggtctcacccaggatgg
gctcctctcaagacactagcaggacatgaacaaaaagtctcgtgcgttgatctatctcct
gatggacagtacatcgcgtctacatcatttgatcgcaccttcaaactctggagcgcggaa
taa
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