Actinia tenebrosa (Australian red waratah sea anemone): 116305004
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Entry
116305004 CDS
T07455
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116305004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116305004
Spliceosome [BR:
aten03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116305004
Complex C
U5 SnRNP specific factors
116305004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
PRO8NT
U5_2-snRNA_bdg
U6-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
116305004
NCBI-ProteinID:
XP_031570678
UniProt:
A0A6P8IXB1
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MAAVMGHNPDLMDEKLQEKARKWQQLQSKRYSEKRKFGFVEAQKEDMPPEHVRKIIRDHG
DMSSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFINEIPW
VVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQLE
LDPGEDAAVCEWFYDHKPLAETKYLNGTSYRRWNLTLPVMATLYRLGNQLLSDLVDENYF
YLFDLKAFFTAKALNVCIPGGPKFEPLVRDFTIHEEDWNEFNDINKIIIRQPVRTEYRIA
FPYLYNSLPFKVQLPWYHRVSVVYIKTEDPDLPAFYFDPLINPISHRHAVKAHEPLPDDD
DSFELPDDIQPFLQDRPLYTDNTAHGIALLWAQRPFNLRSGRCRRAMDVPLVKSWYREHC
PSGHPVKVRVSYQKLLKCYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTTLDWVEAGLQ
VCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPIKTLTTKERKKSRFGNAFHLCREILRLTK
LIVDSHVQYRLGNVDCYQLADGLQYMFSHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYR
FNTGAVGKGPGCGFWAPGWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQ
RVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRXWKANIPWKVPGLPIPI
ENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYL
KDGPYISAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSR
LNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLE
KITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLVYKWCQGINNLQDVWETSEGECNV
MMESKFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQ
FASFIVQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVDTESRHPIRLYSRYIDRI
HVFFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFW
DIKNRLPRSVSTLLWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTFEEFTHKDGVWN
LQNEVTKERTAQCFLRVDNESLGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFR
EAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLI
PQSDLRWSQQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQE
ANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWW
THQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKW
SPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFD
QELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNIFKPSLLADSNDMMDGSVSQ
KYWVDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIALDLAYNLHSAFGNW
FPGIKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIW
FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAK
WKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLK
VEKLGDMILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNADRTKVILKPDK
TIITEPHHIWPSLSDEEWVSVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISA
PSQQRQQIAEIEKQTKEQSQLTATTTRTTNIHGDEIIVSTTSNYETNTFSSKTEWRVRAI
SATNLHLRTNHIYVSSDDIKETGFTYILPKNVLKKFIVISDLRTQISGYLYGVSPPDNPQ
VKEIRCIVMVPQWGTHQTVHLPNMLPQHDYLKEVEPLGWIHTQPNELPQLGPQDVTTHAK
IMADNPSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYDWGRNNKDTGNNPRGYLPSHYEK
VQMLLSDRFLGFFMVPAQGSWNYNFMGVRHSPNMRYELQLSNPKDFYHEVHRPSHFLNFS
AMEESEQITADREDMFN
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttatgggacataatcctgatctaatggacgagaagctacaggaaaaagct
cgcaaatggcagcagctacagtccaagagatacagcgagaagcgcaagtttggctttgtg
gaggcacagaaagaagacatgcctccagaacatgtcagaaagattatccgtgaccatgga
gatatgtccagtaggaaatatcgccatgacaagagagtgtacttgggagctctgaagtac
atgcctcatgcagtcctgaaattactggagaacatgccaatgccgtgggagcagattcgt
gatgtcaaagttctataccacatcactggagccatcacctttataaatgagattccttgg
gttgtagaaccaatctacatggctcagtggggaacaatgtggattatgatgcgtcgtgaa
aagagagatcgtcgtcacttcaaaagaatgagattccctccctttgatgatgaagaacca
cctctagactatgcggacaacatccttgacgttgaaccactggaacctatacaactagag
cttgatccaggtgaagatgctgctgtctgtgaatggttctatgatcacaagccactggca
gaaacaaagtatttaaatggaacatcataccgacggtggaatctcacactacctgtcatg
gcaacactctatcgtcttggcaaccagctgttatctgatctagttgatgaaaactacttc
tacctgtttgatttgaaagccttcttcacagctaaagctttgaacgtctgtatacctggt
ggtccaaagtttgagcctctggtgagagatttcaccatccatgaagaagactggaatgaa
tttaatgacattaacaagattatcattcgacaacccgtcagaacagaatacaggattgca
tttccatatctttataatagcttgcctttcaaagttcagttgccatggtaccatagggtt
agtgttgtgtacatcaagacagaggaccctgatcttcctgcattctactttgatcctctc
atcaatccaatctctcacagacatgctgttaaggcccatgaacctcttcctgatgatgat
gacagttttgaactccctgacgacatccagccattcctacaagacagaccattgtatact
gataatactgctcatggtattgctcttctctgggcacaaagaccttttaacttgaggtct
gggcgctgtaggcgagccatggatgtacctctagttaaatcatggtacagagaacattgc
ccatcaggacatccagtcaaagtgagagtgtcttaccagaagcttttgaaatgttacgtc
ctaaacgcactgaagcacagaccaccaaaggcacagaagaaaaggtatttgttccgttca
ttcaaagccacaaagtttttccagtctacgactctagactgggtggaagctggtctacag
gtctgtcgtcaaggttacaacatgttgaacctcttaatccaccgtaagaacctcaactac
cttcatctggattacaacttcaacttgaagcccatcaagaccttgaccaccaaggaacgt
aagaagtctaggtttggtaatgctttccatctgtgccgtgagattctcaggctcactaag
ctgatcgtggactctcatgtgcagtacagacttggtaatgtggattgctatcagcttgct
gatggtctgcagtacatgttttctcatgttggtcagctaacaggcatgtaccgttacaag
tacaaactgatgagacaaatcaggatgtgcaaggatctgaagcatctcatctattaccga
ttcaacactggagctgttggcaagggtccagggtgtggattttgggccccaggctggcgt
gtgtggctgttcttcctccgtggtattgtaccactcctggaaagatggcttggcaacctg
ttggccaggcagtttgaaggcagacactccaagggagtggccaagacagtcactaagcag
cgtgtggagagtcattttgatttggagttgcgtgcagctgtaatgcacgatattctggac
atgatgcctgaagggatcaagcagaacaaggctagaactatcttacagcatctcagcgag
gcctggagatkctggaaggccaatattccatggaaggtgccaggtctgcccattccaatt
gagaacatgatcctgcgttatgtcaaggccaaagcagattggtggaccaacacrgctcac
tacaacagggagcgtattcgccgtggagcgacagtagacaagactgtgtgtaagaagaat
ctgggtagactgaccaggttgtacctgaaggctgaacaagagagacagcacaactacttg
aaggatggtccatacatctcagcagaagaagctgtagccatctacaccaccacggtccat
tggctggagagcaggaggttctctcccatccccttccctccactctcctacaaacatgac
accaagctgctgatcctagccctagagagactcaaggaggcatacagtgtgaagagtcga
ctgaaccagtctcaacgagaagaacttggtttgattgaacaggcctatgataaccctcac
gaggcactcagcagaatcaagcgtcatctcctcacacagagagctttcaaagaggttggt
attgagttcatggatctttacagycatctcatacctgtctatgatgtggaaccactagag
aagataacagatgcctacctggatcaatatctttggtatgaggcagacaagcgcaggtta
ttccccccttggatcaarccatcagacacagaaccacctccgttactagtctataaatgg
tgtcaaggtatcaacaacttgcaagacgtgtgggaaacatcagaaggagaatgtaacgtg
atgatggaatccaagtttgagaagctctatgagaagattgacttgacgctgctcaacaga
ctgttgcgtctgattgtcgatcataatattgctgattacatgacagctaagaacaatgtg
gtcatcaactacaaggatatgaaccatactaattcctatggaatcatccgtggtcttcag
tttgcatcattcattgtccagtattacggtcttgtactggatttacttgtgctgggtcta
cagcgagctagtgagatggctggtccaccacagatgcctaatgatttcttaacattccaa
gatgtagatactgaatctcggcatccaatcaggctgtactctcgttacattgacaggata
catgtgttcttcaggttcacagcagaagaggctcgtgatctgatccagcgctacctcaca
gaacatcctgaccctaacaacgagaacattgtgggttacaacaacaagaaatgctggcca
cgtgatgcacgaatgcgcctcatgaagcatgatgtcaaccttggtcgtgcmgtgttctgg
gacatcaagaatcgtcttccgcggtctgtcagtacattactatgggagaacagctttgtg
tctgtgtatagtaaggataaccctaacctgctgttcaatatgagtggatttgagtgtcgt
attctgcccaagtgtcgcacaacctttgaggagttcacacacaaggatggtgtatggaac
ttgcaaaacgaagttaccaaggagcgaacagcccagtgtttcttacgtgtagataacgag
tcactagggcgtttccataatcgtgtccgtcagatcctcatggcgtcaggatcaactaca
ttcaccaagatcgtcaacaagtggaacacagcactgattggattgatgacgtacttcaga
gaagctgttgtcaatacccaggaactgctagacttactggtcaagtgcgaaaacaagatc
caaacccgtatcaagattggtctaaactctaagatgcccagtcgtttccccccagtagtg
ttctatacacccaaagaattgggtggcttgggtatgttgtctatgggtcacgtactcatc
ccacagtctgacctcagatggtcacagcagacagacgtaggtatcactcatttccggtcc
ggtatgagtcacgatgaagatcaattgatccctaacttgtacaggtacatccagccttgg
gagagcgagtttattgattctcagagagtctgggctgagtatgcgcttaaacgtcaagaa
gctaacgcccaaaacagacgtttgaccctagaggatcttgaggactcttgggatcgtggt
attcctcgtatcaatacactgttccagaaagacagacatactcttgcttacgacaaggga
tggagagttagaackgatttcaaacaatatcaggtcttgaagcagaatccattctggtgg
acacaccagcgccacgacggtaagctatggaacctgaacaactaccgcacagacatgatc
caagctctaggaggtgtggaaggaatcctggaacacacgctgttcaaggggacctacttc
cccacgtgggagggtctgttctgggagaaggctagtggttttgaggaatccatgaagtgg
tcacctactatcaacagggctaacgtgtatgttggatttcaagtgcagcttgatctgacg
ggtatctttatgcacggtaaaatccctacactcaagatctcactcatccagatcttcagg
gctcatctttggcagaaggttcacgagagcgtcgtgatggatctctgtcaggtatttgac
caagagctggatgctctagagatcgagacggtacagaaagagactattcatccacgtaaa
tcgtacaagatgaacagctcgtgtgccgatattctkctgttcgctgcttataagtggaac
atcttcaaaccttcccttctcgcygactccaatgayatgatggatggatctgtcagccag
aagtactgggtggacgtacagttacgatggggtgactacgattcccacgatatcgaacga
tatgcacgtgctaagttcctggactacaccacagataatatgagtatctacccctcccct
actggggtactgattgcccttgatctggcttacaatcttcacagtgcctttggtaactgg
ttccctggcatcaagcccttgatacaacaagcgatggctaagatcatgaaggctaaccct
gccytgtatgtcctgagagaacgtatccgtaaagcactccagttgtactccagtgagcct
actgaaccgtacctgtcgtcacagaactatggagaactkttctctaaccagattatctgg
tttgtcgatgatactaatgtctatcgtgtcacgattcataagacctttgagggtaatctc
actaccaaacccatcaatggcgccatcttcatcttcaatcctcgtacaggacagcttttc
ttgaagatcatccacacctctgtctgggctggccagaaacgtttgggacagctcgcgaaa
tggaagacagccgaagaagtagctgcgttgattcgttcccttcccgtagaagaacaaccc
aagcagattattgtcacaaggaaaggaatgttggaccctctcgaggttcatcttcttgat
ttccctaacatcgtcatcaaaggtagtgagttacaactacctttccaggcctgcctcaag
gtggagaagctgggagatatgatcctcaaagccaccgaacctcagatggtactattcaac
ctgtacgatgattggctcaagactatctcgtcctacaccgcattctctcgtctgatcctg
atccttagagctttgcacgtcaatgctgatcgcaccaaggtcatccttaaaccagacaag
accatcattactgaaccacatcatatctggccttcattgtcagatgaagaatgggtgagc
gttgaagtgcagctgaaggatcttatcttggctgattatggcaagaagaacaatgtgaac
gtggcttcattgacgcagtccgagattcgtgacatcattcttggtatggagatctctgct
ccttcacaacaacgacaacaaatcgccgagatcgaaaaacagacgaaagaacaatcccaa
ctgacagcaactacaacacgcacgacgaacatccacggtgacgagatcatcgtgtcgacc
accagtaactacgagactaacaccttctcgtccaagaccgagtggcgtgtcagggccata
tcagctaccaacctccatcttcgtactaaccacatctatgtgtcgtctgatgatatcaag
gagactggattcacatatattctgccgaagaatgtgttgaagaagttcattgttatatct
gatctcaggactcagatatctggctatctgtatggcgtaagtcctccagataayccacaa
gtcaaggagatacgatgcattgtgatggtccctcagtggggcacacatcagactgtccac
ctgccgaatatgttaccacagcacgactaccttaaagaagtggaaccccttggatggatt
cacacacagcctaacgaactgcctcagttgggccctcaggatgttacaacgcatgccaag
atcatggctgacaatccatcctgggatggtgagaagacggtcattatcacttgcagtttc
acgccaggatcatgctcactaacagcttacaagttgactccatctggttatgactggggt
cgtaataacaaggatactggtaacaacccacgtggataccttccatctcattacgagaag
gtacagatgctcctgtctgatcgcttccttgggttcttcatggttcctgctcaaggctct
tggaactataacttcatgggtgttcgtcactctcctaacatgcgttacgagctccaactt
tcgaaccctaaagacttttaccacgaggtacaccgcccttctcatttcctgaacttcagc
gcgatggaagagtcagagcagatcaccgcagacagagaagacatgtttaattaa
DBGET
integrated database retrieval system
