Actinia tenebrosa (Australian red waratah sea anemone): 116305121
Help
Entry
116305121 CDS
T07455
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
aten04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116305121
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116305121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aten02000
]
116305121
Transporters [BR:
aten02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
116305121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
116305121
NCBI-ProteinID:
XP_031570815
UniProt:
A0A6P8IY96
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MLFYACVLTVLLLFPSNQAKDIAPIHKKGYCVWYDQCIKSPDGKSLNCLYNGPAKVLNDT
KGISLLKKLCPQFSGDHRTCCSTKQLVALDSNLNTLRQFTSRCPACWQNMLDLFCESTCS
PDQSLFMDPTQVVGFTPSILKIEYYVSPEFKNGLFDSCKNVVFPGNNELVLNLLCGESAE
TCTPRKLLKYMGSTSNGMSPFDLIFPDILPQNLTWMNQTSYQCNESFVNPWTNKTSTICS
CQDCAASCPYIPPVPPTPKPKTILGLRVLSFTLLIIYLVFFFTFMPISFYFITKQKNQYA
RISDGPAPVSSSMPYTNGHNPNVINVRFARKPGMCERMGFWMDRQLRVVFSTWGHWCSCH
PFIVIVGSIIFVGVLAGGLKFYKVIKNPVDLWSAPGSRARKEKDLFDSKFRPFYRTEQLI
ITANPDYPQNHTGYLQYPDDKFIPFGNIAHLDLLNQALDLQLVLTSMKVPFTENGKEXNM
TLEDVCYKPLSPLNNKCVIQSLFQYFQNDKKKLNRCITALAHECKPGMKDYFKADFHDHI
RYCTSAPTSLDDKKWGGGSCLGENGIPINPNIVMGGFNGTDYNMANALIITFVVNNHKDE
SKNAKAEAWEKAFIEYMKNYVADPSNSNLTISFTSERSIQDELDRESKTDIATIIASYSI
MFAYITIALGQVNSCDRIMIDSKFTLGFSGIIIVLCSVACSIGFWSYVGEPATLIIIEVI
PFLVLAVGVDNFFILVQAYQRLNRYSNEDVPKKVGHALGEVAPSMLLSSLAESVAFAFGA
MSNMPAVKVFSLYAAVAVFIDFLFQITWFVALMSLDARRQEKNRMDILCCVRNKDSNATH
QDGFLYQFIQKLYAPALLSDYVRPCVIAFFVAMLFTSISMTARISVGLDQELALPKDSFL
LNWFKDLKHYLHVGSPVYFVLDGQYDYEHDRGQNMICGSAGCNSSSLVQQVFRASLQPES
SKIAMPASSWVDDYFTWLDPSSTCCRILHKQSCSMVNVTKSSFVNGTEVNSTNPVLKCGV
STEPVSPLTFCNATVDSKLCLPCLNKSQSGDRPTSYQFDKFLPFFLKDNPEMKCAKGGHA
AYGNALQLNNLSYPGVNFLVNSSYFMSYHTILKTSDDFVAALKSAYEIADKITKSINNPK
IKVFPYSVFYVFYEQYLTIVTDAWQNLLYCAAAVFVVTFLLMGFNLSIAAIVTFTVAMII
TNLLGLMYLWDINLNAISLVNLVMAVGISVEFCSHIARAFAVNLKETKRKRAEDSLAYMG
SSVFSGITLTKFGGIIVLAFAKSRIFEVFYFRMYLGMVLFGALHGLVFLPVFLSYVGPKP
SRDPDLDNEEDETLRGSFINGERKPLLGSNYSAIQ
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgttattttatgcgtgtgttttgacggtgctcctcttgtttccctcgaatcaggctaaa
gatattgcaccgattcacaagaaagggtactgtgtttggtatgaccaatgcattaaatct
ccagatggcaagtcgctgaactgcctctacaatggcccagccaaggtcctcaacgataca
aaggggatcagcttgctgaagaagctctgtcctcagttttcgggggaccaccgcacttgt
tgtagtaccaaacagcttgtagcattggatagtaatcttaataccctacgccagtttacg
agccgttgtccagcatgttggcaaaacatgttggatttgttctgcgaatcaacatgtagt
cctgatcagtctctatttatggaccctactcaagtcgtaggttttactccgtcaattttg
aagattgagtactatgtttctccagaatttaaaaatgggctatttgattcttgtaaaaat
gtagtgtttcctgggaataacgagttggtgttgaatctgctatgtggcgagagtgctgaa
acatgtacaccgcgtaaactgcttaaatatatgggcagcacaagcaatggaatgtctccc
tttgatttaatatttcctgatatcttaccccaaaacctaacctggatgaatcaaactagc
tatcaatgcaatgaaagttttgtcaacccatggactaacaagacttccacgatatgcagc
tgtcaggactgtgctgcatcttgcccatacatccctcctgtacctccaacaccaaaacca
aagaccatcctgggtctaagagtactttcattcactctgcttatcatctacttggtattc
tttttcactttcatgccaataagtttctacttcatcacaaaacagaaaaaccagtacgca
cgcatatcagatgggccagcacctgtttcatcatcgatgccatataccaatggccataat
ccaaatgttatcaatgtgaggtttgcgcggaagccaggcatgtgcgagagaatgggcttc
tggatggacaggcagctacgagtagttttcagtacatggggtcactggtgcagttgtcat
ccattcatcgtcatcgttggttctattattttcgttggggtgttagccggaggtttgaaa
ttctacaaggttataaaaaacccagtagatttgtggtctgcaccagggagcagggctcgt
aaagaaaaagacctttttgattccaagtttaggccattttatcgtaccgaacagttgatc
atcactgcaaaccctgactaccctcagaaccacacaggttacctacagtaccctgatgat
aagtttataccttttggaaatattgcacatttggatctattgaaccaggccctagattta
cagctggtattgacatcaatgaaggtgccgttcacagagaatggaaaagaacawaacatg
actcttgaggatgtgtgttacaaacccctttctcccttgaataacaagtgcgtcatccag
agtctgtttcagtacttccaaaatgacaagaaaaaactcaatcgctgtattactgccctg
gcgcatgaatgtaagcctggcatgaaagattatttcaaagcagatttccatgatcacata
cgatattgcacaagtgctccgacatcacttgatgacaaaaaatggggtggaggttcatgc
ctgggtgaaaacggtatccctatcaacccaaatattgtcatgggaggatttaacggaact
gactacaacatggcaaatgctctcattattacctttgttgtcaacaaccacaaagacgaa
agcaagaatgccaaggcagaagcatgggagaaggccttcattgagtacatgaagaattat
gttgctgaccccagcaacagcaacttgaccatcagcttcacttctgaaagatctattcaa
gatgagttggacagagagagcaagacagatattgctaccatcatcgccagttacagcatc
atgtttgcatatattaccatcgcactgggtcaggtcaactcctgtgataggattatgatt
gattccaagttcacccttggcttttccggcatcatcatcgtcttgtgttcagttgcttgt
tctattgggttctggagttacgtgggcgaacctgcaaccctcattatcattgaagtcata
ccattccttgttttagctgttggtgtcgacaacttctttattttggtacaagcctaccag
cgtttaaatcgctatagcaatgaggatgtacccaagaaagttggtcacgcacttggtgag
gttgcgcccagtatgcttttgtcatcattggctgagtccgtggcttttgcttttggtgcc
atgtccaacatgcctgctgtcaaggtgttctctctctatgctgcagtagcagtctttatt
gacttccttttccagatcacatggtttgtcgcactaatgtctctagatgccaggcgacaa
gagaaaaaccgcatggacattctctgctgtgtgcggaacaaggacagtaacgcaacacac
caagatggatttttataccagtttatccagaaactctatgccccagcattgctatcagat
tacgtgcgaccatgcgtcattgcattctttgttgctatgctttttactagcatttcaatg
acagccaggatatctgttggacttgatcaagaactggcactaccaaaggattccttctta
ctgaattggttcaaggacctaaaacattacctgcatgtgggatctccagtgtattttgtg
cttgatggccagtatgattatgaacatgatcgagggcagaatatgatctgtggttctgca
ggctgtaattctagttctcttgtgcagcaagttttccgagcctcattacaacctgagagt
tccaagattgctatgcctgcctcctcatgggttgatgactactttacttggttagaccca
agcagtacttgctgccgaattctacacaaacagtcctgcagcatggttaacgtcaccaag
tcatcctttgttaatgggacagaggtgaactccactaacccagtattaaagtgtggagta
tctactgaacctgtcagcccactcaccttttgtaatgctactgtcgatagcaagctgtgc
ttaccctgtttgaacaaatctcaatcaggagatcgtccaacctcctatcagtttgacaag
ttcttgccattcttcctgaaggataacccagagatgaagtgtgcaaagggtggtcatgca
gcttatggcaatgctttacaactcaacaacttgtcctatcctggtgttaattttctagtt
aactcatcatacttcatgtcctatcacacaattctgaagacctcagatgacttcgtggct
gccctcaaaagtgcttatgaaattgcagataagatcaccaagtctattaacaatcctaaa
atcaaagttttcccatacagtgtattctatgtattttatgaacaatacttgactatagtc
actgatgcctggcaaaatctcttgtattgtgctgcggcagtatttgtggtcacattctta
ttaatgggattcaatcttagtattgctgctatagtaacattcacagtagccatgatcata
accaacctgctcggcttaatgtacttatgggatattaatctgaatgcaatctctttagtt
aatcttgtcatggctgttggcatatcagtggagttctgttcacatatagcacgtgctttt
gctgtcaatcttaaagaaaccaaaagaaaacgagcagaagattcattagcctacatgggc
agctctgtttttagtggaattactcttaccaagtttggtggtattatagtattagctttt
gccaagtcaaggatctttgaggttttctatttccgtatgtacttaggtatggtgttattt
ggtgctctacacggtcttgtttttctaccagtattcttgagttatgttggaccaaagcct
tctcgtgaccctgaccttgataatgaagaagacgagacattacgagggagctttataaat
ggtgaaagaaaaccattacttggctcaaattattcagctattcaataa
DBGET
integrated database retrieval system
