Actinia tenebrosa (Australian red waratah sea anemone): 116306878
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Entry
116306878 CDS
T07455
Name
(RefSeq) DNA mismatch repair protein Msh6-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116306878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aten03400
]
116306878
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116306878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Nop14
Motif
Other DBs
NCBI-GeneID:
116306878
NCBI-ProteinID:
XP_031572868
UniProt:
A0A6P8J4F1
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MATLFSYFTKTPKRTSPQTADKAEGAKENKTPPSSAQGVTSENGKCGVSTPCGMSNHQSK
KNTANATFKCFDIVWAKMEGHPWWPSIICKHPTHDKYLKDKKYHVQFFGEPPSRGWVNVK
QVQPFMKGEKKGNGDPAIKKAVIEADRAFQMNTREREELIKCVPSDEEDENDDGEQMEVE
SGKDDTDDDDNVDTGRKNQFKSRQPQRKATMKARHQKKKRFIIESGSEDSESDEFVPESS
ETSDDDSVSSGVDEKDDDEFDEPMSEDEKSKSSRKRKRGSSSTSRPKSKKLMNGNSSPHM
PCINKTPVKPMSLSSSPSVVLPASLANKVSNSATKAASLLSKFQMTSSPSTSSEKKTDED
SGNGFAHEKLEWLKEQKRKDKRGRPMTHPDYDPKTLLVPASFLSSKEVTPAMKQWWTLKS
ENFDTVLFFKIGKFYELYHTDAVIGVKELNLIYMKGNFAHAGFPEIAYDRYSDTLIQKGY
KVARVEQTETPEMMKERCRKERTNSRYDQVVKREICAVTTKGTKMYSFRDGDCTDTEAAY
LLAIKEKGYDDTVGGGSVYGVCFLDTSIGKFHLGQFEDDRQASRLRTLIACHTPVQVLIP
RGGLTSKTQHVLSHELMSTITEQLAPGSEFWDSSKTLKFLAEGTFFQENKMDVESVVWPD
LLKEMTSGDPHCLTAADDYELAISALGSVVWYLKRCLIEEELLSMGKFEKYQPLDCMQDY
NKNEVKFAEGRQHLILDDVTLSNLDILPCGPDTSTEGTLLDRLDYCSTAFGKRLFKQWLC
APLCNPSAINDRLNAVEDLMTMPAAMADVKDILKTLPDLERLLRKIHSMGSHSRAHNHPD
GRAILYNEDTYSKRKISDFLSTLEGFSNACSIVSVFKDSAENFKSKILCQVVCYEETKGK
GRFPHLENNLKFFKNAFDHAKAKKDGVIVPKPGVNEPYDEALDDIKAEKSWFDQYLDKQR
KRLNCRSVVYFGSAKNRYQLEVPDSALSKNTPDDYTLQSQRKGFRRYWTSEIEEHLADLM
DAEDRRDVALKDTMRTIFQSFDKHYDMWDKAVQCLAVLDALVSLATYSSHGDGPMCRPEV
VLPEVSCDGDVQPFLEIREGRHPCISRTFSGGDFIPNHTVVGIVDNEDESGSVSTDNALS
TCVLVTGPNMGGKSTLMRQAGLITVMAQLGCYVPAEKCRLTPVDRVFTRLGAHDRIMAGE
STFFVELSETSTILRHATRNSLVLLDELGRGTATFDGTAIACAVVRELSSNIRCRTLFST
HYHSLVEEFAGDPNVRLGHMACMVENDDEEGDPSKETITFLYKFVKGDCPKSYGFNAARL
AGIPDEIISLAVHKSREFEETLDQIKLFKRFIGNAHDSSSIKNYLNIVKKLKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgttctcctacttcactaaaaccccaaaaagaacatcccctcaaactgca
gataaagctgaaggagcgaaggaaaataagacacctccatcatctgctcaaggagttacc
tcggagaatggaaagtgtggtgtatctaccccttgtggaatgtcaaaccaccaatcgaag
aagaacactgctaacgcgaccttcaagtgttttgacatcgtttgggccaagatggaagga
catccttggtggccaagcataatctgcaaacatcctactcacgataaatatttgaaggat
aagaaatatcatgtgcagttcttcggagagccaccaagccgtgggtgggtcaacgtaaaa
caagtgcaaccattcatgaaaggagaaaagaaaggtaacggtgatccagccattaagaaa
gctgtcattgaagcagatagagcctttcaaatgaatacaagggagagagaagaactgatt
aagtgtgtaccttctgatgaagaagatgagaatgatgatggagagcagatggaggttgaa
agtggtaaagatgacactgatgatgatgataatgtggacactggaaggaagaatcaattc
aaaagtcgacagccacaaagaaaagcaaccatgaaagccagacatcagaaaaagaaacgt
ttcattatagaatcaggatcagaagacagtgaatcagatgagtttgtacctgagagttca
gagacaagtgacgacgatagtgtcagcagtggagtggatgaaaaagatgatgatgaattt
gatgaaccaatgtcagaagatgaaaaatccaagagttctagaaagcgaaagaggggttcg
tcatcaacatctcgtccaaagagtaaaaagctaatgaatggcaacagctctccacatatg
ccatgtattaacaaaaccccagttaagccaatgtcattatcatcgtcaccttctgttgtg
ttgcctgcatcactagccaataaggtatcgaactctgccaccaaggctgcctccttgctt
tccaagttccagatgacatcatcaccttcaacatcaagtgagaaaaagactgatgaggat
agtggtaatggatttgcacatgagaagctggaatggctaaaagaacagaaaagaaaagac
aaacgtggcaggccgatgacacaccctgattatgaccctaagacactactggtccctgct
tcattcctttcatctaaagaagtcactccagctatgaaacagtggtggacactcaagtct
gaaaattttgatacagttctctttttcaagattggcaaattttatgagctctaccatact
gatgctgtcattggagtcaaggaacttaatctgatatacatgaagggtaactttgcacat
gcaggcttccctgagatagcatatgacagatactcagatactctaattcagaaggggtac
aaggttgctagagtagaacaaacagaaactcctgaaatgatgaaggaaagatgtagaaaa
gaacgtacaaattccaggtatgatcaggtggtgaagagagagatttgtgctgttacaacg
aaaggaaccaagatgtacagttttagagatggtgactgcacagacactgaagcagcttat
cttttagctataaaagagaagggatatgatgatactgttggcggaggcagtgtttatgga
gtgtgtttccttgacacatcgattggaaagtttcatcttggtcaatttgaagatgatcgt
caagcatctcgtctcaggacactcattgcttgtcacacaccagtgcaggtgttaattcca
agaggtggtctaacaagcaagacacaacatgttctctcacatgaactcatgtctactatc
actgaacaattagctccagggagtgaattttgggattcatcaaaaaccctcaaattcctt
gcagaaggaactttcttccaggaaaataaaatggatgttgaatcagtggtttggcctgac
ttactcaaagaaatgacaagtggtgatccacactgtctgacagctgctgatgattatgag
ttggccatcagtgctcttggttctgttgtatggtatttaaaaagatgtttaatagaggaa
gagctactctccatgggaaagtttgagaaataccagccacttgactgcatgcaagactac
aataaaaatgaagtcaagtttgcagaaggaagacagcacttgatcctggatgatgtgacc
ctgtccaatctagatattctcccctgtggccctgatacaagtactgagggtactctgcta
gacagattggactattgctctactgcatttggaaaaagattgttcaagcaatggctgtgt
gctcctctttgtaacccctcagccatcaatgacagactgaatgctgttgaggatttaatg
accatgcctgctgctatggcagatgtcaaagatattttgaagacattacctgacctggaa
cgactgctaagaaagatccatagtatggggtcacactcacgagcacataaccatcctgat
ggtagagctatactgtataatgaagacacttacagcaaacgcaagatctcagattttcta
agtactttagaagggttttctaatgcctgttctatagtaagtgtgtttaaagactctgca
gaaaacttcaagtcaaagattttgtgccaggtggtttgttatgaggaaacaaaaggcaaa
ggaagatttccacatctggaaaataatctaaaatttttcaagaatgcttttgaccatgcc
aaggccaaaaaagatggtgttattgttcctaaaccaggggtaaatgaaccttatgatgaa
gcattggatgacatcaaagctgaaaagagttggtttgaccagtatcttgataaacaacgc
aaaagactcaactgcagaagtgttgtttattttggttcagcaaagaatcgttaccagctg
gaagttccagattcagctttgagtaaaaacacaccagatgattacacgttacagtcgcag
agaaaaggcttcagaagatactggacttcagagattgaggaacatttagctgacctaatg
gatgctgaagatcgtagagatgtagcacttaaagataccatgagaacaatttttcagagc
tttgacaaacactatgacatgtgggataaagcagttcagtgtcttgctgtactagacgcc
cttgtctccctggcaacatacagttcccatggtgatggaccaatgtgcagacctgaagtt
gttcttccagaagtatcatgtgacggcgatgtccagccattcctcgagatccgtgaaggc
agacatccatgtatttcacgtacgttcagtggaggagacttcatccctaaccacactgtt
gtaggcatagtagataatgaagatgagagtggttcagtgtcaactgacaatgcccttagc
acatgtgtcttagtgactggaccgaatatgggtggtaaatccacactgatgagacaagct
ggtttaattacagtcatggcacaattagggtgttatgtaccagcagaaaaatgtcgtcta
accccagtagatcgtgtatttaccagattgggtgcacatgacaggataatggcaggcgag
agcacattctttgtagagctgagtgaaacgtcaactattttacgccacgcaacaaggaac
tcgcttgttctgctcgatgagctcggtcgtggtacagccacttttgatggtacagcaata
gcatgtgctgtggtgagagagctctctagtaatattcgatgcagaacgctattctccact
cactaccactccctagtggaagaatttgctggtgatcctaatgttcgccttggacatatg
gcttgtatggtggagaatgacgatgaggagggagatcccagcaaggaaaccatcacattt
ctatacaagtttgtcaaaggagactgtccaaagagttatgggtttaatgcagcaaggctt
gcaggcattccggatgagattatttcactagcagtgcacaagtcaagagagtttgaggag
acattggaccaaatcaaactttttaagaggttcattggaaatgctcacgattcaagctcg
atcaagaattatttaaacatcgttaagaaattaaaaaagtag
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