Actinia tenebrosa (Australian red waratah sea anemone): 116307217
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Entry
116307217 CDS
T07455
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116307217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116307217
03041 Spliceosome [BR:
aten03041
]
116307217
03032 DNA replication proteins [BR:
aten03032
]
116307217
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116307217
Spliceosome [BR:
aten03041
]
Complex A
U1 snRNP components
Sm proteins
116307217
U2 snRNP components
116307217
Complex B
U1 snRNP components
116307217
U4/U6.U5 tri-snRNP components
116307217
Complex C
U2 snRNP components
116307217
DNA replication proteins [BR:
aten03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116307217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TSP9
MEF2_binding
Motif
Other DBs
NCBI-GeneID:
116307217
NCBI-ProteinID:
XP_031573233
UniProt:
A0A6P8J5P3
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MSIGVPIKILHEAEGHVITLETLNGEVYRGKLIEAEDNMNCQLSNITVTTRDGKVSLLEQ
VFIRGSKIRFLILPDMLKNAPMFKKMTQKGSSGTGAAGRGKSAILRAQAAARGRGGRGGG
PPGRGGNVFQRRK
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtctattggagttccaatcaagattttacacgaagcagagggacacgttataacttta
gaaactctcaatggagaagtatacagaggcaaacttattgaggctgaagataacatgaac
tgtcaattgtcgaacattactgttacaacgagagatggaaaagtatcgttactggagcaa
gtatttattcgcggtagtaaaattcgatttctgatcttaccagatatgttaaaaaatgcg
cccatgtttaagaaaatgacacaaaaaggatccagtggtactggagcggcaggacgagga
aaatcagctatattaagagcacaagctgctgcaagagggcgaggtggcagaggaggtggt
cctccaggaagaggaggcaatgttttccagcgaagaaagtag
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integrated database retrieval system