Actinia tenebrosa (Australian red waratah sea anemone): 116308026
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Entry
116308026 CDS
T07455
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
aten04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116308026
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116308026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116308026
04121 Ubiquitin system [BR:
aten04121
]
116308026
03400 DNA repair and recombination proteins [BR:
aten03400
]
116308026
Enzymes [BR:
aten01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116308026
Spliceosome [BR:
aten03041
]
Complex B
Other components
Prp19 complex
116308026
Complex C
Prp19-CDC5 complex
116308026
Ubiquitin system [BR:
aten04121
]
Ubiquitin ligases (E3)
U-box type E3
116308026
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
116308026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Vps41
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_ACSF4
U-box
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
zf-Nse
B-prop_COPA_B_2nd
PAS_11
Motif
Other DBs
NCBI-GeneID:
116308026
NCBI-ProteinID:
XP_031574235
UniProt:
A0A6P8JCD1
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MKSNHLSYQIITFFPFIAWSRCPTCAVTTRVSICPGFGPFSDEIEDSNCKNSIIWICVCV
LHLWATGWLANANTDTEPGLPVVKERDTGIYAHNASLLTCGKESKMAMYCSISNEVPEHA
CLSPVSGHVFEKRLIEKYIAENGTDPITGEALAEEQLIDIKVSPLVKPRPPSATSIPAIL
KTLQDEWDACMLHTFSLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLK
PQAGIAVTPITPTPAASMPAEEKMEVSAAEPEGEAGMSEEVLQKLQKKATLLTAERKKRG
KKMPEDLTTPDEIRSYHQVATYPGLHSASTPGILALDVQLSDTSKVLTGGLDKSAVVFHK
DAEQVVATLKGHTKKVTNVIYHPTEEIGITGSADSSIRVWSISNASCAHIIKAHDQAVTG
LSLHATGDFLLSCSADQHWAFSDIHTGRVLTKCLSDPSVNQGLTCAQFHPDGLIFGTGTS
DSLIKIWDLKERANVAKFPGHSGPIKDISFSENGYYLATSADDSVVKLWDLRKLKNFKTI
TLEDRFEVKSLSFDQSGTYLAVGGTDIQIYLVKQWELLNSFNDHTGLVTGVKFGRHAGSV
ISSSMDRHLKFFSS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaatcatttatcgtatcaaatcattacctttttccctttcatcgcatggagc
cgctgtccaacatgtgcagtcacaacacgtgtatcaatctgtcctggctttggccctttc
tcagacgaaattgaagattcaaactgcaagaattcaattatttggatttgtgtttgcgta
ttgcacctctgggccaccggatggcttgctaacgccaacacagatacagaacctgggctt
cctgtggtaaaggagcgagacactgggatctacgcccataatgcctcactcctcacatgc
ggtaaagaatccaagatggcgatgtactgctcaattagcaacgaagtccccgaacatgcc
tgcctttcacctgtatctggccatgtctttgaaaaaagactgatagaaaagtatatagct
gagaatggtacagatcctattactggagaagcactagcagaggagcagcttattgatata
aaagtgagtcctctcgttaagccaaggccaccatcagcaactagtattcctgctatttta
aaaaccttgcaagatgaatgggatgcatgcatgttgcacacattctcgttacgacagcag
cttcaaacagctagacaagaactttctcatgccttgtatcaacatgatgctgcttgccgt
gtgattgctaggttgaccaaggaagttactgctgcccgtgaagctttggccactctgaaa
ccacaagctggtattgccgtcactccaatcacacctactcctgcggcatctatgccagct
gaagaaaagatggaagtatctgctgctgagcctgaaggagaagctggcatgtcagaggaa
gtgctacaaaagttgcaaaaaaaagcaactctccttacagcggagcgtaaaaagagagga
aagaaaatgccagaagacctcacaacaccagatgaaatcagaagctatcatcaagttgct
acttatccaggtcttcatagtgcaagcactcctggaatccttgcgcttgatgttcaactt
tcagatacatctaaagtgttgacaggtggacttgataaaagtgctgttgtatttcacaaa
gacgcagaacaggttgttgcaactctcaagggacacaccaaaaaggtcaccaatgttatc
taccatcctacagaggaaattggtattacaggatcagctgatagcagtattagagtctgg
tctatatccaatgcatcgtgcgctcacattatcaaggcacatgaccaagctgtcactggg
ctcagtcttcatgctactggtgatttcttgttgagttgttctgctgaccagcactgggca
ttctctgatatacatactggacgtgtcttgactaagtgtctatccgacccatctgtcaat
caaggtctaacttgtgcccagtttcatcctgatggtcttatcttcggtactggaacttct
gatagcttaatcaagatctgggatctcaaggagagggctaacgtagccaagttccctgga
cactctggaccaataaaagacatcagcttctctgaaaatggttactacttagctacttca
gcagatgattcagtcgttaagttatgggatttgagaaaacttaaaaatttcaagaccatc
acacttgaggatagatttgaggtgaaatcactcagttttgaccagagtggtacttacttg
gccgtaggaggaactgatatacagatatacttggtaaagcaatgggagttgctgaacagt
tttaacgatcacactggtctagtaacaggagttaagtttggtagacatgccggttctgtc
atctcttctagtatggatcgtcacctcaaattcttttcttcataa
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