Actinia tenebrosa (Australian red waratah sea anemone): 116308160
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Entry
116308160 CDS
T07455
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten04512
ECM-receptor interaction
aten04518
Integrin signaling
aten04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116308160
04518 Integrin signaling
116308160
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116308160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aten00536
]
116308160
Glycosaminoglycan binding proteins [BR:
aten00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116308160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
WAP
Motif
Other DBs
NCBI-GeneID:
116308160
NCBI-ProteinID:
XP_031574406
UniProt:
A0A6P8J357
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MAFPRELLILMFWVFLKSEIVTAQVVRRGICPSFEPPEECPSTPDNDCLVDGDCDFSLKC
CSDGCGKRCIEPLPEPREQIVIGPNGRNGSPGPKGFPGEQGPPGASTGEGIKGPPGPRGP
RGQPGSRGVPGPPGPPGSPSIGQIPTYPGEKGPVYNPLIRHDTMASVREIPGPQGRPGPK
GTMGYPGGPGSNGLSGEQGYSXPRGDPGAVGQPGAKGFEGDRGAPGKRGRRGYPGPKGVV
GDPGKDAHNGKAGHQGKRGRVGEAGGAGEDGERGPDGEPGEEGPVGKQGPAGRKGIQGPF
GTVGMQGPIGNSGPAGRMGVQGSAGPSGAPGKPGVPGPKGKEGPRGEKGYAGVEGDRGDR
GKPGVKGANGNIGRAGVPGRPGAKGVHGDRGEQGVSGIQGNPGPRGYNGAEGPRGSPGQT
GDRGKDGGIGPVGNKGRPGRPGVTGMRGLPGVPGRRGARGDSGEEGPEGNPGERGVPGAQ
GVAGPDGLRGRKGPEGVRGKRGLRGRKGDHGETGADGRDGLPGEPGIRGRPGTSGKDGYP
GSVGKNGDDGIAGEDGLQGPPGPVGSEGLPGPKGDAGASGTKGISGRPGKIGSKGNRGEA
GAMGDAGKRGIMGAPGQLGEQGNQGPEGDRGSVGKQGIQGVSGSKGEQGFPGDRGSDGLP
GKPGKQGAAGEKGDPGDMGLQGPVGNPGSAGRQGPAGIKGPMGDRGRRGDIGIRGEKGIR
GAAGKPAAKGEPGDPGKNGRVGKNGEMGLQGLPGPDGKQGIDGVQGQKGESGERGKPGAH
GNMGDSGERGDMGAPGKQGFLGQAGAAGPLGQPGIVGLIGLKGGVGDIGGAGPRGPTGNK
GPTGGQGAKGGAGDIGGEGDAGRNGARGRPGLPGPPGEAGSSGKIGPPGFPGKRGGKGAQ
GVAGERGDAGLPGQPGQLGINGMTGDSGIQGAIGPVGPPGGSGPQGPAGSIGGKGSRGLR
GLDGSKGERGEAAKPGKPGKPGPTGEQGKPGKTGKKGPTGEIGPSGAAGGIGARGANGIK
GLQGATGAIGGLGVPGIPGIEGEPGESGVPGIDGVLGPEGRTGLKGMPGVPGEQGAQGIT
GSKGDTGNQGQKGEVGVQGQPGPQGPMGIDGVLGSRGETGSRGETGNRGPVGSFGPAGPR
GNTGPQGPDGSVGPMGQKGDRGPQGEEGFQGNPGPPGPPGIPGSVVGRYSLLQSAPNLAT
TKTDQMRLYRSIAGAQAKDPMFLNINKFSDPTAAYLSLSVQVEVFKRPLGTRLHPARMCR
DLKLGRPNLENGEYWIDPNEGTIDDALLVFCDFSLNASCIFPNKTRTEKKKWFFGPDGYK
WFGKYFNGFQQFKYASDPIQLIFLRLLSDRAKQNVTYHCRNSAAWYDEESHDYGKSIKLQ
GDNGVELHASSTKKYKPTILKDDCRVKDGTWRQTIMEIDTGNPNRLPIHDIAVYDIGDTD
EEFGLEIGPVCFS
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcctcgagagttactcattctcatgttttgggtattcctcaagtctgagatc
gtaactgcccaagttgtacgtagaggtatttgcccctcgttcgaaccccccgaggaatgt
ccatccacacctgataacgattgtttggttgacggagattgtgatttctccttgaagtgc
tgcagtgatggctgtggaaaaaggtgtatagagccactacctgagccaagggaacaaatc
gtgataggtccaaatggtcgaaatgggagccccgggcctaaaggttttcctggagaacaa
ggtcccccaggtgcaagcactggtgagggaataaaagggcctcccggaccacgaggaccc
cgtggacaacccggctctcgaggtgtgccaggacctccagggccaccgggatcaccgtcc
attggacagattccaacttatccaggcgaaaaaggtcctgtttataatccgctaatacga
cacgatacgatggcaagcgtgcgggaaataccgggacctcaaggccgaccggggccaaaa
ggaaccatgggatatcccggtggaccaggaagtaacggattatcaggagaacaaggatac
tctrgtccaagaggagatcccggagcggttggtcagccaggcgcaaaaggtttcgagggt
gatcgaggtgctccgggaaaacgaggaaggcgtggctaccctggacccaagggcgttgtc
ggtgaccccggtaaagacgcacataatgggaaggccggtcatcaaggaaagcgtggccgc
gtaggggaagctggtggggcgggagaggatggtgagaggggaccagatggagaaccaggc
gaagaaggacccgttggtaaacaaggtccagctggacgtaaaggaattcaaggacctttt
gggacagttggaatgcagggtcctattgggaatagtggcccggctggtagaatgggagtt
cagggttcagctggtccgagtggtgctcctggtaaacctggtgtaccaggtcccaagggc
aaagaaggcccacgaggggagaagggatatgctggcgttgaaggagatagaggagacaga
ggaaaaccgggtgtcaagggtgctaatggtaacatcggtagagctggtgttccaggaaga
cctggggcaaaaggagttcacggtgaccgcggagaacaaggtgtctctggtatacaaggc
aacccaggacctcggggatacaacggagccgagggaccgcggggtagcccaggacaaacg
ggcgacagaggtaaagatggcggcataggtcccgtggggaacaaaggacgaccgggcaga
ccaggcgttactggcatgagaggattaccaggagtacctggacgaaggggtgcacgcgga
gactccggagaagagggtccggaaggaaatcctggagaaaggggagtacctggagcacag
ggtgttgctggacccgacgggttgcgaggtagaaagggacctgaaggggtacgcggcaaa
cgaggccttcgtggaaggaagggagaccatggcgaaactggagctgatggtcgggacggg
ttacctggtgaaccgggtattcgtggacgaccgggcacatcaggaaaagacggctatcct
ggatctgttggtaaaaacggtgatgatggaatagccggggaagatggtcttcaggggcca
ccgggaccagttggctctgaaggactgccgggaccaaaaggagatgcgggtgcgtcagga
actaaaggtatctctggacgacccggtaaaatcggctctaaaggtaatagaggcgaagct
ggagccatgggtgatgctggtaaacgcggaataatgggagctcctgggcagttaggcgaa
caaggaaaccaaggacctgaaggagatcggggttctgtgggcaagcaaggcatccaagga
gtcagtgggtcgaaaggtgaacagggattccctggagacagaggatcagatggcctgcct
ggaaaaccgggaaagcaaggagctgccggtgagaagggagaccctggagacatgggttta
caaggacccgttggtaaccccggctcagcaggaagacaaggtccagctggtatcaaagga
ccgatgggagacaggggacgccgtggagacatcggtattcgaggcgaaaaaggaatccgt
ggtgcagctgggaagccagcagccaagggcgagccgggtgatcctggtaagaatggtcga
gtgggcaagaatggagagatgggcctacagggtcttccaggacccgatggaaagcaaggc
atcgatggagtccagggtcaaaagggagaatctggtgaaagaggcaaacctggagctcac
ggtaacatgggagactctggtgagcgaggagacatgggagctcctggaaaacaaggcttc
cttggccaagcaggcgcagcaggtcctttgggtcagcctggaatagtgggactgattgga
ctcaagggcggagtaggcgacataggaggagctggtccaagaggtccaactggtaacaag
ggcccaacaggaggccaaggagccaaaggaggtgcaggagatataggaggagagggagat
gctggtcgtaatggtgcaagaggcaggcctggattgccgggccctcctggtgaagctgga
tcctccggaaaaattggtccacctggattccccggaaaaaggggtggaaaaggagcccag
ggagtcgcaggtgaaagaggagacgcaggattacccggacagcctggacaactaggaata
aatggaatgacgggtgatagtggtatccagggtgcgatcggacctgttggtcctcccggt
gggtctggacctcaaggacctgcgggatcaattggtgggaagggatcacgtggtcttcgt
ggtcttgacggctccaagggggaacgcggtgaagctgcgaaacctgggaaacctgggaaa
ccaggacctacgggagaacaaggaaaacctggaaagacaggcaaaaaaggaccaacggga
gaaataggtccaagtggagctgctgggggcattggagcaaggggagcaaatgggatcaag
ggcttacaaggagcaacaggtgcaataggtggcctcggtgttccaggtatacctggaatc
gaaggagaacctggtgaatctggtgttcctggaatcgacggagtattgggtccagaagga
cgtaccggcttgaagggaatgccaggagtaccgggagaacagggagcgcaaggtattacg
ggaagtaaaggtgacaccggcaaccaaggacagaagggtgaagttggtgtccaaggtcag
cccggccctcaaggaccgatgggaattgacggagtactcggttctcgtggggaaacagga
agcagaggagaaacgggtaataggggacctgttggctcattcggtcccgcgggaccacga
ggaaacactggcccacagggtcctgatggatctgttggtcccatgggtcaaaagggagac
cgtggacctcagggagaagaaggatttcagggcaatcctggacctcccggaccacccggc
atacctggctccgtggttggcagatactcattgctccaatctgccccgaatctagcaaca
accaagacagatcagatgcggctgtacagaagtattgctggagctcaagcaaaagatcct
atgttcctcaacattaacaagttctcagatccaactgcagcatacttatctctcagcgtt
caagtggaagtcttcaaaagaccccttggcaccagacttcaccctgccagaatgtgccgt
gaccttaaattaggtagacccaatctagagaatggtgaatactggattgatcctaatgaa
ggcaccatcgatgatgcattactcgtcttctgtgatttcagtttaaatgcctcttgtatt
ttccccaacaaaacaaggacagagaaaaagaaatggttttttggtcctgatggctacaaa
tggtttggtaaatacttcaatggattccagcaattcaagtacgcctcagatcccattcaa
cttatcttcctacgtctgctgagtgaccgcgccaagcaaaacgtcacataccactgccgc
aactcagcagcctggtacgatgaggagtcacatgactatggaaagtcaatcaagcttcaa
ggagataatggagtagagctccatgcctcgagcaccaagaaatacaaaccaacgattctt
aaagatgactgccgagttaaagatggtacctggcgtcagacaataatggaaatcgacaca
ggcaacccaaaccgtctccctatccacgatattgctgtatacgacattggagacacggac
gaggagtttggacttgaaataggaccagtttgcttctcttga
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integrated database retrieval system
