Allochromatium tepidum: Atep_00350
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Entry
Atep_00350 CDS
T07447
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
atep
Allochromatium tepidum
Pathway
atep00300
Lysine biosynthesis
atep01100
Metabolic pathways
atep01120
Microbial metabolism in diverse environments
atep01230
Biosynthesis of amino acids
Module
atep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Atep_00350 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atep01002
]
Atep_00350 (dapE)
Enzymes [BR:
atep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Atep_00350 (dapE)
Peptidases and inhibitors [BR:
atep01002
]
Metallo peptidases
Family M20
Atep_00350 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BCU05358
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Position
35616..36755
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AA seq
379 aa
AA seq
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MSPTLELACELVRRRSVTPQDQGCQELIAERLAAIGFTVEPMPFGEVTNLWARRGTEGPL
LCLAGHTDVVPAGPPDLWDSDPFDPVIRNGMLHGRGAADMKGSVAAMVTAVESFVAAHPE
HPGSIAFLLTSDEEGPAIDGTVKVVERLQQRGEHIDYALVGEPSSRERLGDSIKNGRRGS
LSGFLTIHGKQGHVAYPHLARNPFHAAAGALAALCAEVWDQGNAYFPPTSFQIANLNMGT
GAENVIPGQLEAQFNLRFSTELDPETIKRRVRAILDRGDFDYELSWRLSGHPFLTTPGEL
VEAARAAIREICGIETELSTSGGTSDGRFIAPTGAQVVELGPLNATIHQVDECVAVADLD
QLHRIYGRVIERLLLPTAD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccacgctcgagctggcctgtgaactcgtccgccgtcgctcggtcacgccccag
gatcagggctgtcaggaactcatcgccgagcgtctggcggcgatcggcttcaccgtcgag
ccgatgcccttcggcgaggtcacgaatctctgggcgcggcgcggcaccgaaggcccgttg
ctctgtctggccggacataccgacgtggtgccggccgggccgccggatctctgggattcg
gatcccttcgacccggtcatccgcaatgggatgttgcacggacgcggcgcggcggacatg
aagggttcggttgcggccatggtgacggcggtcgagtccttcgtcgccgcgcatcctgag
catccaggctcgatcgcctttctcctcaccagcgacgaggaaggcccggcgatcgatggc
acggtcaaggtcgtcgaacggctccagcagcgcggcgagcacatcgactatgccctggtc
ggcgagccgtcgagtcgtgagcgactgggtgattcgatcaagaacgggcggcgcggcagt
ctctcgggcttcctgaccatccacggcaaacagggccatgtcgcctatccgcatctggcc
aggaatcccttccatgccgccgccggcgcgctggcggcactctgtgccgaggtctgggat
cagggcaacgcctacttcccgccgacgagcttccagatcgccaacctcaacatgggcacg
ggcgccgagaacgtcatccccggccaactggaggcgcagttcaacctgcgtttctcgacc
gaactcgaccccgagaccatcaagcgccgggtgcgcgccatcctggaccggggcgatttc
gactacgaactctcctggcgtctgtcgggtcatcccttcctgacgacacccggcgagctg
gtcgaggcggcacgcgcagccatccgcgaaatctgcggcatcgagaccgaactctcgacc
agcggcggcacctcggacggacgcttcatcgccccgaccggcgcccaggtggtcgaactc
gggccgctcaacgcgaccatccatcaggtcgacgaatgtgtcgcggtcgcggatctcgat
cagctacaccgcatctacgggcgggtgatcgaacggttactgttgccgacggcggactga
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