Allochromatium tepidum: Atep_00420
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Entry
Atep_00420 CDS
T07447
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
atep
Allochromatium tepidum
Pathway
atep03030
DNA replication
atep03430
Mismatch repair
atep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atep_00420
03430 Mismatch repair
Atep_00420
03440 Homologous recombination
Atep_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atep03032
]
Atep_00420
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_00420
Enzymes [BR:
atep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atep_00420
DNA replication proteins [BR:
atep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atep_00420
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atep_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_5
AAA_16
AAA_2
AAA_14
AAA_30
nSTAND3
TsaE
PIF1
Mg_chelatase
SKI
Rad17
AAA_28
AAA_assoc_2
ABC_tran
NACHT
AAA_24
ORC-CDC6-like
Herpes_Helicase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BCU05365
UniProt:
A0ABM7QHY9
LinkDB
All DBs
Position
complement(40290..41960)
Genome browser
AA seq
556 aa
AA seq
DB search
MSYQVLARKWRPRSFDDMVGQQHVVRALSNALDRDQLHHAYLFTGTRGVGKTTLARILSK
ALNCEQGVSSHPCGVCSACREIDSGRFVDLLEVDAASRTKVDQTRELLENVPYAPARARF
KVYLIDEVHMFSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQLNLRRLLP
GEIVDRLRYVLEQEGLEFELAALPLLARAADGSLRDALSLLDQAIAFGGGRVVEAETRAM
LGTVSGDLALDILDALAAGDGAAVLGVVERAAAMTPDFAELLRELIGLLHRLALIRQVPK
TLAEDDPDRVRLLALAEQLAPEDVQLFYQIALTGQTDLPLAPDPRGGLEMVLLRALAFRP
VPGARSVETSRFGADGTPAARPAANVQAAPATPGVRPVPLQSSDPPPPRADSRAGATEPT
PIQSGTKTLENAADWQRLVAQLSIGGIANQLAHNCAFCGYSDGRLSLQLDPTAAGLRTPS
TLERLKSALEQALGRSVELEIKVARPEQETLAQRRAREAGERRQAAVDQMHADPVARSMR
ETFDADWAPGSIRPAD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtgcttgcccgcaaatggcgtccccggtcgttcgacgatatggtcggg
cagcagcatgtcgtgcgcgcgctctccaatgcactcgaccgcgatcagctccatcacgcc
tatctgttcaccggcacccgcggcgtcggtaagaccacactcgcgcgcatcctgtccaag
gcgctcaactgcgagcagggcgtcagctcccatccctgcggggtctgctcggcctgtcgt
gagatcgacagcgggcgtttcgtcgatctgctcgaagtcgatgcggcctcgcgcaccaag
gtcgaccagacccgcgagctgctcgaaaacgtcccctatgccccggcgcgggcgcgcttc
aaggtgtacctcatcgacgaggtgcacatgttctcgggccacagtttcaatgcgctgctc
aagacgctcgaagagccgccgcctcatgtgaagttcctgctcgcgaccaccgatccgcag
aagatcccggtcacggtgctctcgcgctgtctccagctcaatctgcgccggttgctgccg
ggcgagatcgtcgaccggctccgctatgtccttgaacaggaaggactggagttcgagtta
gccgccctgcccttactcgcgcgtgccgccgacggcagtctgcgcgacgcgctcagtctg
ctcgatcaggcgatcgccttcggcggcggacgggtcgtcgaggccgagacgcgcgccatg
ctcggcaccgtgagcggcgatctggcgctcgacatcctcgatgccctggccgccggcgat
ggtgccgccgtgctgggcgtcgtcgagcgtgcggcggccatgacgcccgatttcgccgag
ctcctgcgcgagctgatcggactcctgcaccggctggcgctgatccggcaggtgcccaag
accctggccgaggacgaccccgatcgcgtccgactgctggcgttggccgaacagctcgcc
cccgaggacgtgcagctcttctatcaaatcgccctgaccggccagaccgacctgccgctg
gcgcccgatccgcgcggcgggctggagatggtactgctgcgcgcgctcgcctttcgcccg
gtcccaggtgcgaggtctgtcgaaacgtcccggttcggcgcggatggaactccagccgct
cggccggcagcgaacgtccaggccgcaccagcgacaccgggcgtgcgacccgttccgctt
cagtcgtccgatccaccgccgccacgggccgactcccgcgctggagccacagagccgacg
cccatccagtccggcacgaagacactcgaaaacgccgccgactggcagcgactcgtcgcg
cagttgtcgatcggcggcatcgccaaccagctcgctcataactgtgccttttgcggatac
agtgacgggcggctcagtctccagctcgatccaacggccgccggcctgcggactccaagc
acactggagcgtctgaagagcgcgctcgaacaggcgctcggccgttcggtcgagctggag
atcaaggtcgcgcgccccgagcaggagaccctggcacaacggcgcgcgcgcgaggccgga
gagcgccgacaggccgccgtcgatcagatgcacgccgatccggtcgcccgctcgatgcgc
gagaccttcgatgcggattgggcgccggggagcatccgtccggccgactga
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