Allochromatium tepidum: Atep_01440
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Entry
Atep_01440 CDS
T07447
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atep
Allochromatium tepidum
Pathway
atep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Atep_01440 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atep03019
]
Atep_01440 (groL_1)
03110 Chaperones and folding catalysts [BR:
atep03110
]
Atep_01440 (groL_1)
03029 Mitochondrial biogenesis [BR:
atep03029
]
Atep_01440 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atep04147
]
Atep_01440 (groL_1)
Enzymes [BR:
atep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Atep_01440 (groL_1)
Messenger RNA biogenesis [BR:
atep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Atep_01440 (groL_1)
Chaperones and folding catalysts [BR:
atep03110
]
Heat shock proteins
HSP60 / Chaperonin
Atep_01440 (groL_1)
Mitochondrial biogenesis [BR:
atep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Atep_01440 (groL_1)
Exosome [BR:
atep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Atep_01440 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
Atep_01440 (groL_1)
Exosomal proteins of breast cancer cells
Atep_01440 (groL_1)
Exosomal proteins of colorectal cancer cells
Atep_01440 (groL_1)
Exosomal proteins of bladder cancer cells
Atep_01440 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L12
EAD9
Motif
Other DBs
NCBI-ProteinID:
BCU05467
LinkDB
All DBs
Position
complement(152471..154105)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKQIFFSENARVRMLRGVDVLANAVKVTLGPKGRNVVIEKSWGAPTVTKDGVSVAKAI
ELKDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQAMVREGLKAVAAGMNPMDIKRGM
DQAVEAAIKELQALSRPCSTNKEIAQVGAISANSDDSIGNIIAEAMEKVGKEGVITVEEG
KSLHNELDLVEGMQFDRGYLSPYFINNQQSQKTELDDPYILLHDKKISNIRDLLPVLEGV
AKAGKPLLIIAEDVEGEALATLVVNNLRGILKVCAVKAPGFGDRRKAMLQDIAILTGATV
ISEEVGLSLEKATLNDLGTAKKVQVAKDDTTIIDGAGSHDAIKARCEQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIKVGAATEIEMKEKKMRVEDALHATRAAVEEGIVPGGGVALV
RALNAIKDLKGANDDQTVGITIARRAMEEPLRQIVANAGEEPSVILNKVAEGSGSFGYNA
ANGEFGDMMEMGVIDPTKVTRSALQNACSVAGLMITTEAMVADEPKKEKAPAAPAGGGMD
DMDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagcagatcttcttcagtgaaaatgcccgtgtccgtatgttgcgcggcgtc
gacgtcctggccaatgcggtcaaggtcacgctgggtccgaagggccgcaacgtcgtgatc
gagaagtcctggggcgcgccgaccgtgaccaaggacggcgtctcggtcgccaaggcgatc
gaactcaaggacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgacatcgccggtgacggcaccaccaccgcgaccgtgctggcgcaggccatggtc
cgcgagggcctgaaggcggtcgccgccggcatgaacccgatggacatcaagcgcggcatg
gatcaggccgtcgaggctgcgatcaaggaactgcaagccctgtcgcgtccctgctcgacc
aacaaggagatcgcccaggtcggcgccatttcggccaactccgacgactcgatcggcaac
atcatcgccgaggcgatggagaaggtcggcaaggaaggcgtcatcacggtcgaggaaggc
aagtcgctgcacaacgagctggacctggtcgaaggcatgcagttcgaccgcggctatctg
tcgccctacttcatcaacaaccagcagagccagaagaccgagctggacgatccctacatc
ctgctgcacgacaagaagatctccaacatccgtgatcttctccccgtgctggaaggtgtc
gccaaggccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcg
accctggtcgtcaacaatctgcgcggcatcctcaaggtctgcgcggtcaaggcgccgggc
ttcggtgatcgtcgcaaggcgatgctccaggacatcgccatcctgaccggcgcgaccgtg
atctccgaggaagtcggtctgtcgctggagaaggcgaccctgaacgatctgggtaccgcc
aagaaggtccaggtcgccaaagacgacaccaccatcatcgacggtgccggttcgcacgat
gccatcaaggcccgttgcgagcagatccgtgcccagatcgaggagacgacttccgactac
gatcgcgaaaagctccaggagcgtttggccaagctggccggcggtgtggccgtgatcaag
gtcggcgcggccaccgagatcgagatgaaggaaaagaagatgcgcgtcgaggatgccctg
cacgcgacccgcgcggcggtcgaggaaggcatcgtccccggcggcggtgtcgcgctggtg
cgcgccctgaacgcgatcaaggatctcaagggcgccaacgacgaccagaccgtcggcatc
accatcgcccggcgcgcgatggaagagccgctgcgtcagatcgtcgccaatgccggtgaa
gagccgtcggtcatcctgaacaaggtcgccgaggggtcgggcagcttcggctacaacgcc
gccaacggcgagttcggcgacatgatggagatgggcgtcatcgacccgaccaaggtcacg
cgctcggcgttgcagaacgcctgctcggtcgccggtctgatgatcaccaccgaagccatg
gtcgccgacgagccgaagaaggagaaggctccggccgcgcccgccggcggcggcatggac
gacatggactactga
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