KEGG   Allochromatium tepidum: Atep_01630
Entry
Atep_01630        CDS       T07447                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
atep  Allochromatium tepidum
Pathway
atep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Atep_01630 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atep03019]
    Atep_01630 (deaD)
   03009 Ribosome biogenesis [BR:atep03009]
    Atep_01630 (deaD)
Enzymes [BR:atep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Atep_01630 (deaD)
Messenger RNA biogenesis [BR:atep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Atep_01630 (deaD)
Ribosome biogenesis [BR:atep03009]
 Prokaryotic type
  rRNA helicases
   Atep_01630 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA DeaD_dimer ResIII AAA_22 CMS1 UTP25_NTPase-like
Other DBs
NCBI-ProteinID: BCU05486
UniProt: A0ABM7QI90
LinkDB
Position
169584..171584
AA seq 666 aa
MDTPDETSVGFDALGLSPVIAQAVQNLGYESPTAIQSRCIPHLLAGRDLLGQAQTGTGKT
AAFALPLLSRLDPDLRKPQVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIYGGQGYRL
QLSQLERNPQVIVGTPGRVMDHIRRGTLALDAIRTLVLDEADEMLNMGFAEDIDWIFDQA
PAERQVALFSATMPPAIRRVAQTRLVDPVEVKIAADSETVDTIDQHHCVVTRFHKLDVLT
RIMELEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTVERLKQGQID
VLVATDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILLVEPRERGLL
KSIERVIRRPIPSMEPPSAAALSESRIDRFIGEIRKAQSEQDLDFFYRLLSRISQEQEIE
MMDIAAALAYLNQRERPLNVKEDPPRPPKRFEERGERGRGRDGDRRQGGWEERPPRRERF
DERDGNREEHRPRFDRAERSERPERPERGQPRRDDADLTSYRIEVGHQHGVSPREIVGAI
ANESGLEGRYIGRIDIRDDHSVVDLPKGMPNEVFQHLKRVYVRGQALRITPADESAGAGR
GGAWEGRRDSGRDRSGPPREREARPPRAGGDFQRRDRDGYAPRRPSSGKSNDGGKRGPGS
GRKFRD
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggataccccagacgaaacgagcgtcggcttcgacgcgctcggtctttcacccgtgatc
gcgcaagcggtccagaacctcggctacgaatccccgacggcgatccagagccggtgtatc
ccgcatctgctcgccggtcgcgatctgctcggccaggcccagaccggcaccggcaagacc
gccgccttcgccctgccgctgctcagccgtctcgatcccgatctgcgcaagccgcaggtg
ctggtgctcacgcccactcgcgagctcgcgctccaggtcgccgaggccttccagcgctat
gccacggatctcaagggtttcaacgtcctgcccatctacggcggtcagggctacaggctg
caactctcgcagctcgagcgcaacccacaggtgatcgtcggcacgccgggacgggtcatg
gaccacatccgtcgcggcaccctggcgctggacgcgatccgcaccctggtgctcgacgaa
gccgacgagatgctcaacatgggcttcgccgaggacatcgactggatcttcgatcaggct
ccggccgagcgtcaggtcgcgctcttctccgccaccatgccgccggcgatccggcgcgtg
gcccagacgcgactggtcgatccggtcgaggtcaagatcgccgccgattccgagacggtc
gacaccatcgaccagcatcactgcgtcgtcacccgcttccacaagctcgacgtgctcacg
cgcatcatggagctggagccgttcgacgggctgctgatcttcgtgcgcaccaagaatgcc
accaccgaactggccgacaagctcaaggcgcacggcttcgccgccgagccgctcaacggc
gacatgaaccaggagatgcgcgagcgcaccgtcgagcggctcaagcagggtcagatcgat
gtactggtcgccaccgatgtcgccgcgcgcggtctggacgtcgaacgcatcagccatgtc
gtcaactacgacatcccgaccgatccctcggcctatgtgcaccgtatcggtcgcaccggg
cgcgccggacgcgccggacgggcgatcctactggtcgagccgcgcgagcgcggactgctc
aagtcgatcgagcgcgtcatccggcgtccgatcccgtcgatggaaccgccctcggccgcc
gcgctcagcgaatcgcgcatcgaccgcttcatcggcgagatccgcaaggcgcagtcggaa
caggatctggatttcttctatcgcctgctctcgcgcatcagccaggagcaggagatcgag
atgatggacatcgccgccgcgctggcctatctcaatcagcgcgaacggccgttgaacgtc
aaggaggatccgccgcgcccgcccaagcgcttcgaggagcgcggcgagcgtggacgcggt
cgcgatggggatcggcgtcagggcggttgggaggagcgcccgccgcgccgcgagcgtttc
gacgaacgggatgggaatcgcgaggaacaccggccgcgtttcgatcgggccgaacgctcg
gagcgtccggagcgccccgaacgcggtcaaccgcgccgtgatgacgccgatctgaccagc
tatcgcatcgaggtcggtcatcagcacggcgtgagtccacgcgagatcgtcggcgccatc
gccaacgaatccggcctggaagggcgttatatcggccgcatcgacatccgtgacgaccac
tcggtcgtcgacctgcccaaggggatgccgaacgaggtcttccagcatctcaagcgtgtc
tacgtgcgcggtcaggcgctgcggatcacgccggccgatgagagcgccggagcagggcgg
ggcggagcctgggaaggtcgtcgtgactcgggccgtgaccgttcgggtccgccgcgcgag
cgtgaggcgagaccaccgcgcgccggcggcgatttccagcgccgcgaccgcgatggctat
gcaccgcgccggccgagctcgggcaagagcaacgatggcggcaagcgcggtccgggttcg
ggacgtaaattccgcgactga

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