Allochromatium tepidum: Atep_04710
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Entry
Atep_04710 CDS
T07447
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atep01011
]
Atep_04710
Enzymes [BR:
atep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Atep_04710
Peptidoglycan biosynthesis and degradation proteins [BR:
atep01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Atep_04710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BCU05794
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All DBs
Position
506509..508482
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AA seq
657 aa
AA seq
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MSPSLSKRSRRPTAFPVMLTLALFAVSCFVALETRADARADFLAAESALERGDQSVFQTL
ADGLRDDPLYPYLLFAELTRDLAQAPDARIESFLADYADTPLAERLRPAYLRRLADAGRW
ADYARLYRPDDSVERRCLYLRALIETGRTEEALPEVESIWLSGQSRPNACDPVFAHWSEA
GHLTTELVWARIRLALEAGRTGLARHLGRRLPESERPWLDLWLAVDRTPERILEAGPFQE
AHPMRAAILAHGIVMLARSDLERAALALQRLEPALADDRSARERAHVAVGRALAESGDRL
GLLHWDVIEPSADNLPEQERRLRAAINLRAWDWLAKWIERMPEGEIKRERWLYWLGVAQE
FLGQSEASQATLAAAARERSFWGFMAADRLDRPYNLEHRPVPVTPEQLRTLARDPAYRRI
LALDQLGREVDVRREWRTLARRLDSDGLMAAARLAHDRGWHDQAIVMLARSGYWDDLEIR
FPLAYQDLAAEQAWQIGIEPEWIQALMRQESVFARTIASPAGAVGLMQLMPATAGEVAAE
LGLPQPSRWSLLDPDLNIRLGSAYLTRMRDRFGHAALATAAYNAGPARVRSWLPEECMSA
DLWIAAIPFAETRGYVERVLSYRIIYAARLGLEPKRLREFLPPVPGRAFRDEPPMQF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgtcactgtcgaagcggtcacggcgtccgaccgctttcccggtcatgctaacc
cttgcgctgttcgccgtctcctgcttcgtggcgctggagacccgcgccgacgcccgcgcg
gacttcctcgctgccgagtcggcgctcgaacgcggcgatcagtcggtctttcagacactg
gccgacggcttgcgcgatgacccgctctatccctatctgctgttcgcggagctgacgcgc
gatctggctcaagcgccggatgcacgcatcgagtcctttctcgccgactatgccgacacc
ccgctggccgagcggctgcgtccggcctatctgcgccggctagccgacgccggacgttgg
gccgattacgcgcgcctctatcggccggacgactcggtcgagcgccgttgtctctatctg
cgcgccctgatcgagaccggacgcaccgaggaggcactgcccgaggtcgagtcgatctgg
ctatcgggccagtcgcgaccaaatgcctgtgatccggtgttcgcgcactggagcgaggcg
ggacatctgaccaccgagctggtctgggcacgcatccggctggcgctggaggccggaagg
accggactggcgcgtcatctcggtcggcggctgcccgagtccgagcggccctggctggat
ctctggctcgccgtcgaccggactcccgaacgtatcctggaggccggtccgttccaggaa
gcccaccccatgcgcgcagcgatcctggcgcatggcatcgtgatgctggcgcggagcgat
ctcgaacgcgcggcgctggcgttgcagcgtctggaaccggccctggcggacgatcggtcg
gcgcgcgaacgggcgcatgtagctgtcggacgcgcgttggccgagtccggtgatcgcctg
ggtctgctccattgggacgtcatagagccgagcgcggacaacctgcccgagcaggaacgc
cgtctgcgcgcggccatcaacctccgcgcctgggattggctggccaaatggatcgaacgg
atgcccgagggcgagatcaagcgcgaacgctggctctactggctgggcgtggcccaggag
ttcctgggacagtccgaagcctcacaggcgacactcgctgccgccgcgcgcgaacgcagc
ttctggggcttcatggccgccgatcgtctggatcggccctacaacctggagcaccgcccg
gtgccggtcacgcccgagcagctccggacgctggcccgggatccggcctacaggcgcatc
ctcgcgctcgatcagctcgggcgtgaagtcgatgtgcggcgtgaatggcgcacgctcgcc
cgtcgcctggacagcgatggactcatggccgccgcccggctggcgcacgatcgcggttgg
cacgatcaggccatcgtcatgctcgcccgttcgggttactgggacgatctggagatccgt
tttccgctcgcctatcaggatctggccgccgagcaggcctggcagatcgggatcgagccg
gaatggatccaggccttgatgcgtcaggagagcgtcttcgcccgcaccatcgcctcgccg
gcgggggccgtgggtctgatgcagctcatgcccgcgaccgccggcgaggtcgccgccgag
ctggggctgccccagccctcgcgctggagcctgctcgaccccgatctcaatatcaggctc
ggcagtgcctatctgacccgaatgcgtgatcgcttcggccatgcggccctggcgacggcg
gcctacaatgccggcccggctcgtgtgagaagctggctgccggaggagtgcatgagcgcc
gatctctggatcgccgccatccccttcgccgagacgcgcggctatgtcgagcgcgtcctg
agctatcggatcatctatgccgcgcgtctggggctggagccgaaacgtctgcgcgaattc
ctgccgccggtgcccggacgcgcgttccgggacgagccccccatgcaattctga
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