Allochromatium tepidum: Atep_08460
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Entry
Atep_08460 CDS
T07447
Symbol
oxyR
Name
(GenBank) LysR family transcriptional regulator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atep03000
]
Atep_08460 (oxyR)
Transcription factors [BR:
atep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Atep_08460 (oxyR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BCU06169
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All DBs
Position
complement(923207..924142)
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AA seq
311 aa
AA seq
DB search
MNLRDLKYILAVAETRHFGRAAERCFVSQPTLSGQIKKLEDELDVVIFERTNRSVEITPV
GAAILAHARLALEQVEAIEQVARAHQDPMAGPLRIGAIPTLSPYLMPLILMPLKQSYPQL
RLVLSEEITDLLLGRLARHEIDAALLATSVDENEFESLPLFEEPFWLAHPVNHPFDAHPE
ITARDLERIELLLLADGHCLTHQVMEVCRLSERPLRGEMADLRASSLETLLQLVRAGFGC
TLIPALAIRGGWMSDSGIVTRPLAALPDAYRRISLVFRKSFPRRQALEAFAAVVRDHLPN
TVKPLSPTHPV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctacgcgacctcaaatacatcctcgccgtcgccgagacgcgccatttcgggcgc
gccgccgagcgctgtttcgtcagccagccgaccctgagcggtcagatcaagaagctggag
gacgaactcgacgtggtcatcttcgagcgcaccaaccgctcggtcgagatcaccccggtc
ggcgcggccatcctcgcccatgcgcggctggcgctcgaacaggtcgaggccatcgagcag
gtcgcgcgcgcgcatcaggatcccatggccggaccactgcgcatcggggccatcccgacg
ctcagcccctatctgatgccgctgatcctgatgccgctcaagcagagctatccccagctc
aggctggtgctctccgaggagatcacagatctgctgctcggtcggctcgcgcgccacgag
atcgacgccgcgctcctggccacgtccgtcgacgagaacgaattcgagagcctgccgctg
ttcgaggaacccttctggctggcccatccggtcaaccacccgttcgacgcccatcccgag
atcacagcccgggatctggaacgcatcgaactgctgctgctggccgacggccactgtctg
acccatcaggtgatggaggtctgccgtctgagcgagcgtccgctacggggcgagatggcc
gacctgcgcgcctccagcctggagacgttgctgcaactggtgcgcgccggcttcggctgc
acgctcattccggcgctggcgatacgcggcggctggatgagcgacagcgggatcgtcacc
cgcccgctggccgccctgcccgatgcctatcggcgcatctcactggtcttccgcaagagc
ttcccgcgccgccaggcactggaagcctttgccgccgtcgtccgcgaccatctgccgaac
acggtcaaaccgctgtcgcccacgcatccggtctag
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