Allochromatium tepidum: Atep_08520
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Entry
Atep_08520 CDS
T07447
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atep03000
]
Atep_08520
Transcription factors [BR:
atep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Atep_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_28
MarR_2
HTH_5
HTH_24
SBP_bac_11
HTH_AsnC-type
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BCU06175
LinkDB
All DBs
Position
complement(932037..932960)
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AA seq
307 aa
AA seq
DB search
MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLPLFERLGKQVVVT
EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGTLCIAVASTVNYFAPRLMAIFQQRHPG
IGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEAFMDNPLVVIAPPDHPLAGEH
GIPLARLAEETFVMREEGSGTRQAMERFFSERGQEIRHGMQMTRNEAVKQAVRSGLGLSV
VSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEAARIALP
TRVIQAV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcactgcgccaactgcgggtcttcgaggccgtcgcgcgccacaacagctac
acgcgcgcggccgaggagctgcatctgagtcagccggccgtctcgatgcaggtgcgccaa
ctggaggatgagatcgggctgccgctgttcgagcggctcggcaaacaggtcgtcgtcacc
gaagccggacgcgaggtgttccattacagccgcgccatcggccagtcactgcgcgagatg
gaagaggtgctggagtcgctcaagggcgtcagccggggtaccctgtgcatcgccgtggcc
agcacggtcaactatttcgccccacggctgatggccatcttccagcagcgtcatccgggg
atcggcctgcggctcgacgtcaccaatcgcgaaagcctggtgcagatgctcgacagcaac
tcggtcgacctggtactcatgggcgtgccgccgcgcaacgtcgaagtcgaggccgaagcc
ttcatggacaatccgctggtggtgatcgccccgccggatcatccgctggccggcgagcac
ggcattccgctggcgcggctggccgaagagaccttcgtgatgcgcgaggaaggctcgggc
acccggcaggcgatggagcgcttcttcagcgaacgcgggcaggagatccgtcacgggatg
cagatgacgcgcaacgaggcggtcaagcaggcggtgcgttcggggctggggctgagcgtg
gtctcgctgcacaccatcgaactggagctggagacgcggcggctggtgacgctggacgtc
gaaggctttccggaccggcgtcagtggtatctggtctatcggcgcggcaagcggctctcg
ccggccgccggcgcttttcgcgagttcgtgctgagcgaggcggcgcggatcgcactgccg
actcgggtgatccaggcggtttag
DBGET
integrated database retrieval system
