KEGG   Allochromatium tepidum: Atep_11600
Entry
Atep_11600        CDS       T07447                                 
Name
(GenBank) hypothetical protein
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
atep  Allochromatium tepidum
Pathway
atep03030  DNA replication
atep03430  Mismatch repair
atep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:atep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Atep_11600
   03430 Mismatch repair
    Atep_11600
   03440 Homologous recombination
    Atep_11600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atep03032]
    Atep_11600
   03400 DNA repair and recombination proteins [BR:atep03400]
    Atep_11600
Enzymes [BR:atep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Atep_11600
DNA replication proteins [BR:atep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Atep_11600
DNA repair and recombination proteins [BR:atep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Atep_11600
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 Intein_splicing DNA_pol_IIIA_C tRNA_anti-codon PT-HINT HROB
Other DBs
NCBI-ProteinID: BCU06483
LinkDB
Position
1249024..1253082
AA seq 1352 aa
MDPTFVHLHLHSEYSLVDGLVRIKPLVKAVAAAGMPAVAVTDQGNLFSLVRFYKAAVGAG
VKPIAGADLWVRNPEDANQPHRLVLLAQDEPGYRNLTRLISRGFVEGQHLGVAQVERDWV
LEAHQGLIALSGGPRGDVAEALLKGRPEIAGQRLDVWLSVFGDRYYLELMRTGRPQEGEL
VEASVDLAIRRGVPVVATNDVRFLAAGDFEAHEVRVCIHQGRTLDDPRRPRDYSEEQYLR
TPAEMAELFADLPEALENTVEIAKRCNLELKLGKNYLPVFPVPEGMTTDSFFAEQSRRGL
EWRLERILDRDAPDYVERRRVYEERLETELAVIIQMGFPGYFLIVADFIQWAKDNGIPVG
PGRGSGAGSLVAYALKITDLDPIQHELLFERFLNPERVSMPDFDIDFCMEGRDRVIDYVA
RKYGREAVSQIITFGTMAAKAVVRDVGRVMGHPYGFVDKIAKMVPFELGMTLDKALKESE
DLKRAYDQDEEVRAILDMARKLEGLTRNAGKHAGGVVIAPTVLTDFAPLYCEPGGVNLVT
QFDKDDVEQVGLVKFDFLGLRTLTIIDWALKTINAGRAAKGEPPLDIERIDPRDREAFDL
LKRCETTAVFQLESRGMKELIKKLQPDCFDEITALVALFRPGPLQSGMVDDFIERKHGRA
EVAYPHPDLEPILKPTYGIILYQEQVMQIAQVLAGYSLGGADILRRCLAGSTEVVDAATG
RRVTLTEIAAAPEVWIGREVFALDLKTQKIVRRPIDAVYHNGVQEVFEVTTRTGRRIQAT
ATHLFYTLVGWKPLGAFVEGETIGLAARLPLESDEPQSRIGVESDVLWDLIESIRPLGDM
EVFDLTIPKHHNFIANDFIAHNCMGKKKPEEMAKQRETFEQGALARGIDGQLASHVFDLM
EYFSGYGFNRSHSAAYALVSYQTLWLKAHYPAAFMAAVLSADMDNTDKVVTLIDECRTMK
LRVEPPAINRSDYHFTIADDKTVVYGLGAVKGVGESAIEAMLEARRAGGPFRDLWDFCGR
IDLQRVNRRVLESLIRAGALDELGPNRATLMAQLPPALKAAEQYHSTRAAGQVDLFGALA
PSGPPTPDPQLARETLADWEDEQRLQGEKETLGLYLTGHPIDRYEDELKAMGGARIARLL
ETDRELGRRDRRDREKRTVVGLVVGVRHGKTQRGRMGSVVLDDRTGRIEATVFSELYEQV
RHLLVADRILSITGALNFDEFRDAWSLRADSVRIFEEARATAADHLLLTLDLSDPVAHAR
GLERVEELRAVLLAHRDTARESSLPIRLIYRRPGAVGELMLGSAWRVRPADALLKQLRHL
LGTESVRVSYERPVQQAPMPELQSAPRLRAVS
NT seq 4059 nt   +upstreamnt  +downstreamnt
gtggacccaaccttcgtacatctgcatctgcattccgagtattcgctggtcgatggcctg
gtgcgcatcaagccgctggtcaaggcggtcgcggcggccgggatgccggcggtcgccgtc
accgatcagggcaacctgttctcgctggtgcgcttctacaaggcggccgtgggcgccggg
gtcaagccgatcgcgggggcggatctctgggtgcggaatccggaggacgccaatcagccg
catcgtctggtgctgctggctcaggacgagccgggctatcgcaatctgacgcggctgatc
tcgcgcggcttcgtcgagggccagcatctgggggtggcgcaggtcgagcgtgattgggtg
ctggaggcgcatcaggggttgatcgcgctctcgggcgggccgcgcggcgacgtggccgag
gcgctgctcaagggccgacctgagattgcgggtcagcggctcgatgtctggctgtcggtg
ttcggggatcgctattacctggagctgatgcgcaccggacgtccccaggagggcgagctg
gtcgaggcgagcgtagatctggcgatccggcgcggcgtgcctgtggtcgcgaccaatgac
gtgcggttcctggcggccggcgacttcgaggcccatgaggtgcgcgtctgcatccatcag
ggccgcacgctcgacgacccgcgccgtccgcgcgactacagcgaggagcagtatctgcgc
accccggcggagatggccgaactcttcgccgatctgcccgaggcgctggagaacacggtc
gagatcgccaagcgctgcaacctggaactcaagctcggcaagaactatctgccggtgttc
ccggtgcccgagggcatgaccaccgacagcttcttcgccgagcagtcgcgccgggggttg
gaatggcggttggagcggattctcgaccgtgacgcgccggattatgtcgagcggcgccgg
gtctacgaggagcggctggaaaccgaactcgcggtcatcatccagatgggcttccccggc
tatttcctgatcgtggccgacttcatccagtgggccaaggacaacggcatcccggtcggg
ccggggcgcggctcgggtgccggctcgctggtcgcctatgcgctcaagatcacggatctc
gacccgatccagcatgagctgctgttcgagcgttttctgaaccccgagcgcgtgtccatg
cccgacttcgatatcgacttctgcatggaagggcgcgatcgggtcatcgactatgtggcg
cgcaaatacgggcgcgaggcggtgtcgcagatcatcaccttcggcaccatggcggccaag
gcggtggtgcgcgatgtcgggcgcgtcatggggcatccgtacggcttcgtcgacaagatc
gccaagatggtgcccttcgagttggggatgacgctcgataaggcgctcaaggagagcgag
gatctcaaacgcgcctatgaccaggacgaggaggtgcgggccatcctcgacatggcgcgc
aagctggaggggctgacccgcaatgcgggcaagcacgctggcggcgtggtgatcgcgccg
acggtgctgaccgatttcgcgccgctctattgcgaaccgggcggggtgaatctggtcacg
cagttcgacaaggacgacgtggagcaggtcggtctggtcaagttcgacttcctggggctg
cgtaccctgaccatcatcgactgggcgctcaagaccatcaatgccgggcgtgcggccaag
ggcgagccgccgctcgacatcgagcgcatcgatccgcgcgaccgggaggcgttcgatctg
ctcaagcgttgcgagacgacggcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctccagcccgattgcttcgacgagatcacggcactggtggcgctgttccgg
ccagggccgctgcaatcgggcatggtcgacgacttcatcgagcgcaagcatggacgcgcc
gaggtcgcctatccgcatccggatctggagccgatcctcaagcccacctacggcatcatt
ctgtatcaggagcaggtgatgcagattgcgcaggtgttggcggggtattcgctcggtggg
gcggacattctgcgtcgctgtctggccggctcgaccgaagtggtcgatgccgcgaccgga
cggcgggtgacgctgaccgagatcgccgccgcgcccgaggtttggatcggacgcgaggtg
ttcgcgctcgacctgaagacccagaagatcgtgcgccggccgatcgacgccgtctatcac
aatggcgtgcaggaggtattcgaggtcacgacccgcaccggacgccggattcaggcgacg
gcgacgcatctgttctatacgctcgtgggctggaagccgctgggggcctttgtcgagggc
gagacgatcggactggcggcacggttgccgctggagagcgatgaacctcagtcaaggatt
ggcgtcgagtcggatgtcttgtgggatttaatcgagtcgatccgcccgctaggtgatatg
gaggtcttcgatctcactattcccaagcatcacaacttcatcgccaacgattttattgcc
cacaattgcatgggcaagaagaagcccgaggagatggccaagcagcgcgaaacctttgag
cagggtgcgctagcacgaggaattgatggtcagctcgcctcgcatgtatttgatttaatg
gaatatttttctggttatggatttaataggagtcacagtgccgcctacgccctggtcagt
taccaaaccctctggctcaaggcccactatccggccgccttcatggccgccgtgctctcg
gcggacatggacaacaccgacaaggtcgtcaccctgatcgacgaatgccggacgatgaag
ctcagggtcgagccgccggcgatcaatcgctccgactatcacttcaccatcgccgacgac
aagaccgtcgtctatggtctgggcgcggtcaagggcgtgggtgagtcggcgatcgaggcc
atgctggaggcgcgtcgtgccggcggtcctttccgcgatctctgggacttctgcggacgt
atcgacctgcagcgggtcaaccgccgtgtgctggagtcgctgatccgcgccggtgcgctc
gacgaactcggccccaaccgcgctacgctcatggcccagctgccgccggcgctcaaggcc
gccgagcagtatcacagcacccgcgcggccggtcaggtcgatctgttcggcgcgctcgca
cccagcgggccgcccacaccggacccgcaactcgcccgcgagacactcgccgactgggag
gacgaacagcgtctccagggcgaaaaggagacgctcggactctatctcaccggacatccg
atcgatcgctacgaggacgaactcaaggcgatgggtggggcgcgtatcgcccgcttgctg
gagaccgaccgcgaactcggacgccgcgaccgacgcgaccgcgaaaaacgcaccgtcgtc
gggttggtggtcggcgtgcggcatggcaagactcagcgcggacgcatgggctcggtggtg
ctcgacgaccgcaccgggcgcatcgaggccacggtcttctccgagctctatgaacaggtg
cgtcatctgctggtcgccgaccggatcctgagcatcaccggtgcgctcaacttcgatgag
ttccgcgacgcctggtcattgcgcgccgacagtgtgcggatcttcgaagaggcacgcgcg
actgccgccgatcatctgctcctgacgctggatctgtccgatccggtcgcccatgcgcgc
ggactggagcgggtcgaggaactgcgcgcggtgctgctcgcccatcgcgatacggcgcgc
gagtccagtctgccgatccggttgatctaccgtcgtcccggtgcggtcggtgaactgatg
ctggggagtgcctggcgcgttcgtcccgccgatgccctgctcaagcagttgcgccacttg
ttgggcaccgagagcgtccgtgtgtcctatgagcgcccggtccagcaggcgcccatgccc
gagttgcagtcagcgccgcgattgcgggcggtgtcctga

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