Allochromatium tepidum: Atep_11890
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Entry
Atep_11890 CDS
T07447
Symbol
metR
Name
(GenBank) LysR family transcriptional regulator
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atep03000
]
Atep_11890 (metR)
Transcription factors [BR:
atep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Atep_11890 (metR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_30
MarR
HTH_23
MarR_2
HTH_24
HTH_20
HTH_50
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BCU06512
LinkDB
All DBs
Position
1276503..1277420
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AA seq
305 aa
AA seq
DB search
MAQLERTHLAIVRAVDQHGSLTAAAEQLHLTQSALSHAIRKLEDQLGVAIWTREGRRLRP
TQAGAYLLAVANRLLPQLTQAEERLRQFAQGERGTLRIGIECHPCYQWLLKVVSPYLAAW
PDVDVDVRQEFQFGGIGALFAHEIDLLVTPDPLYTGGLRFEPVFDYEQVLAVGAGHRLRG
LPYVQPEHLAEETLITYPVALDRLDIYTRFLLPAGIRPKRHKPIETTDILLQMVAGGRGV
AALPRWLVDEQAGKLDLGAVRLGAQGIAKQIFVGIREREADIDYLRAFVALARDHGDGVG
SSVSG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactggaacgcacccatctggcgatcgtccgtgccgtcgatcagcacggttca
ctgacggccgctgccgagcaactgcatctcacccaatcggcgttgagccatgcgatacgc
aagctggaggatcagctcggggtggcgatctggacgcgggaggggcgccgtctgcgtccg
acgcaagccggcgcctatctgctggcggtggccaatcgtctgctgccgcagctcacacag
gccgaagagcgtctgcggcagttcgcccagggggagcgcggcaccctgcgcatcggcatc
gagtgccatccctgctatcaatggctgttgaaggtggtatcaccctatctggccgcttgg
ccggacgtggatgtggatgtccggcaggaattccagttcggcggaatcggtgcgctcttt
gcgcacgagatcgatctgctggtgacgcccgatccgctctacacgggcggcctgcggttc
gagccggtgttcgactatgagcaggtgctggcggtcggcgcggggcatcgtctgcgcggt
ctcccatacgtgcaaccggaacatctggccgaggaaacactgatcacctatccggtcgcc
ctcgaccggctcgacatctatacccgcttcctgctgccggccggcatccggcccaagcgc
cacaagccgatcgaaacgaccgacatcctgctgcagatggtcgccggcggtcgcggtgtc
gcggcactgccccgctggctagtggacgaacaggccggcaagctcgatctcggggcggta
cgactcggtgcgcaggggatcgccaagcagatcttcgtcggcatccgcgagcgcgaggcc
gacatcgattatctgcgtgccttcgtcgcgctcgcccgtgatcacggcgacggggtggga
tcgagcgtcagtgggtag
DBGET
integrated database retrieval system
