Allochromatium tepidum: Atep_12210
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Entry
Atep_12210 CDS
T07447
Symbol
ntrX
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K13599
two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
atep
Allochromatium tepidum
Pathway
atep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Atep_12210 (ntrX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
atep02022
]
Atep_12210 (ntrX)
Two-component system [BR:
atep02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
Atep_12210 (ntrX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
nSTAND3
AAA_5
MCM
TraD_C
DUF116
Motif
Other DBs
NCBI-ProteinID:
BCU06544
UniProt:
A0ABN6GA64
LinkDB
All DBs
Position
complement(1308831..1310198)
Genome browser
AA seq
455 aa
AA seq
DB search
MSATHILVVDDEPDIRGLVKEILEDEGYAVAVAENGEAARHALRDRRPDLILLDIWMPDV
DGISLLKEWAEDDELPCPVIMMSGHGTVETAVEATRLGAYDFLEKPLSMAKLLLTVERAL
EADKLQQENIGLKRRAPQVHEPVGRSAVMQRLREQVKRIAQHDTWVLITGEAGSGRETFA
RYLHSQSARKERPFIDLSVSSLAGGNAARELFGVEEGEHTHYGSLEKASGGTLLLDEVAD
MEWEAQSKLLGALDSGSFLRVGGSEPVRIDVRIVAITQRNLEEEVRAGRFREDLFYHLNV
VPLNIPPLDEHAEDVPDLLNFYLDYFATHEKLPYRRFSVGAQNFLRNYGWPGNVRELKNL
VQRVLILGAGDEISQKEVESALGAPPPVQIQTLDGLVSFDQPLRQAREKFEKAYLDYQLE
KHQGNVSKMAKEAGMERTHLYRKLRSLGIEIKERR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaacccatatcctggtcgtcgacgacgaacccgacatccgcggcttggtcaag
gagatcctcgaagacgagggctatgccgtggccgtggccgagaacggcgaggccgcgcgg
cacgccctgcgcgatcgccgtcccgatctgatcctgctcgacatctggatgcccgacgtc
gacggcatctcgctgctcaaggaatgggccgaggacgacgagctgccctgtccggtgatc
atgatgtcgggtcacggcacggtggagacggcggtcgaggccacccggctcggggcctac
gacttcctcgaaaagccgctgtcgatggccaagctgttgctgacggtcgagcgggcactc
gaggccgacaagctccagcaggagaacatcggactcaaacgccgtgcgccccaggtccat
gagccggtcggacgcagcgcggtcatgcagcgactgcgcgagcaggtcaagcgcatcgcc
cagcacgacacctgggtgctcatcaccggcgaggccggcagcggacgcgagaccttcgcg
cgctatctgcactcgcagagcgcacgcaaggaacgtcccttcatcgacctgagcgtctcc
tcactggccggcggcaatgccgcgcgcgagctgttcggcgtcgaggagggcgagcacacg
cactacgggagcctggaaaaagcgtccggcggcaccctgctgctcgacgaggtcgccgac
atggaatgggaggcgcagtccaagctgctcggggcgctcgacagtggttccttcctgcgc
gtcggcggcagcgagccggtgcgtatcgatgtacgcatcgtcgccatcacccagcgcaat
ctggaagaagaggtgcgcgccggacgcttccgcgaggatctgttctaccatctcaacgtg
gtgccgctgaacatcccgccgctcgacgagcacgccgaggacgtgcccgatctgctcaac
ttctatctcgactacttcgccacccacgagaagctgccctaccggcgcttcagcgtcggc
gcccagaacttcctgcgcaactacggctggccgggcaatgtgcgcgaattgaagaacctg
gtgcagcgggtgctgatcctgggcgccggcgacgagatcagccagaaagaggtcgagagc
gcgctcggtgccccgccgccggtccagatccagacgctcgacgggctggtgtccttcgat
cagccgctgcgtcaggcgcgcgaaaagtttgaaaaggcctatctcgactatcagctcgaa
aagcaccagggcaacgtcagcaagatggccaaggaggccgggatggaacgcacccatctc
taccgcaagctgcgctcgctcgggatcgagatcaaggagcggcgttga
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