Allochromatium tepidum: Atep_13020 Help Entry Atep_13020        CDS       T07447                                  Name (GenBank) hypothetical protein   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism atep  Allochromatium tepidum Pathway atep03020   RNA polymerase Brite KEGG Orthology (KO) [BR:atep00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Atep_13020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:atep03021]     Atep_13020    03400 DNA repair and recombination proteins [BR:atep03400]     Atep_13020 Enzymes [BR:atep01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Atep_13020 Transcription machinery [BR:atep03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      Atep_13020 DNA repair and recombination proteins [BR:atep03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       Atep_13020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Biotin_lipoyl_2 Apocytochr_F_C Peptidase_M23 Motif Other DBs NCBI-ProteinID:  BCU06625 LinkDB All DBs Position 1399392..1403912 Genome browser AA seq 1506 aa AA seqDB search MKDLLKIIKQQGQALEFDAIKIGLASPEMIRSWSYGEVKKPETINYRTFKPERDGLFCAK IFGPITDYECICGKYKRLKHRGVVCEKCGVEVTLAKVRRERMGHIDLASPVAHIWFLKSL PSRIGLLLDMTLRDIERILYFESFVVIDPGMIVDLERGQLLNDEQYLDVLEANGDEFDAR MGAEAIYELLRSIDMAAEIRRMREEIESTNSETKIKKLAKRLKLMESLLASGNRPEWMIL TVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML QEAVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGP TLKLHQCGLPKRMALELFKPFIFSKLQFRGLAATIKAAKKMVERGTPEVWDILEEVIREH PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE ARALMMASNNILSPANGEPIIVPSQDVVLGLYYMTRERIGAKGEGGLFVDIDEARRAYET GHADLHARCRVRIREVIKHKDGSLTERTSIKETTVGRAMVFAIVPEGLPFELVDRPLGKK QISMLINTCYRRLGLKDTVVFADQIMYLGFRMATRAGISIGLDDMEVPRDDRDAKMDKGA LLAAAELEVQEIQQQYASGLVTNGERYNKVVDIWSRTNDQVAKAMMSKLGTDLAKTDPGF EAERLVGEYRQAALSAVEPEGYEALRAIFAEWQGELRSAARALAREELSLEAFNARFDEL TARYRPEVVTKLDPERIKASEGRERLAIGLKDAPTRLVEERKQDSFNSIYMMANSGARGS AAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVIQYFISTHGARKGLADTALKTANS GYLTRRLVDVAQDMVVLEEDCGTDQGLLMAPIIEGGDVVEPLRERILGRVAAVDVYRPGV DNPELICKAGTLLDESWVERFEEVGIDQVRVRSPITCESRLGVCAQCYGRDLARGHRVNI GEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVSSIEIKNGGSARLHNIKTVQHHSG NLVAVSRSGELTVVDERGMEKERYKVPYGATLRVGDGDTVKPGDVVATWDPHTHPVVTEV AGRLEFEDFIEGVTVQAQTDDVTGLSSLVVIDPKQRPAAGKDLRPMVKLLDEDGNELNIA GTDLPARYALSSGAIVSVANGANVGVGDILARIPQESSKTRDITGGLPRVADLFEARKPK EPALLAEASGTISFGKDTKGKQRLIITKDDGETVEELIPKWRHVNVFEGERVERGEVIAD GELASHDILRLKGVTALAEYLVKEIQDVYRLQGVKINDKHIEVIVRQMLRKVEVTAPGDT RLLRGEQVEHALLIDENKRVMAEGKQPALFEPLLLGITKASLATESFISAASFQETTRVL TEAAVRGSTDRLVGLKENVIVGRLIPAGTGLSYHQERRRQRVLDSGKVEMATEDPEQALN TPEAAE NT seq 4521 nt NT seq  +upstreamnt  +downstreamnt ttgaaagatctactcaaaatcatcaagcaacagggtcaggcactcgaattcgacgcgatc aagatcgggctggcctcgcccgagatgatccgttcctggtcctatggcgaggtcaagaag cccgagaccatcaactatcgcaccttcaagccggagcgcgacgggctgttctgcgccaag atcttcggacccatcaccgactacgagtgcatctgcggcaagtacaagcgtctgaagcat cgcggcgtggtgtgcgagaagtgcggcgtcgaggtcacgctggccaaggtgcgccgcgag cgcatgggtcacatcgatctggccagtccggtggcgcacatctggttcctcaagtcgctg ccgtcgcgcatcggtctcctgctcgacatgaccctgcgcgacatcgagcgcatcctctat ttcgagtcgttcgtcgtcatcgatccgggcatgatcgtggatctcgaacgcgggcaactg ctcaatgacgagcagtatctcgacgtgctcgaagccaacggcgacgagttcgacgcacgc atgggcgccgaggccatctacgagctgctgcgcagcatcgacatggcggccgagatccgc cgcatgcgcgaggagatcgagtcgaccaactccgagaccaagatcaagaagctggccaag cgcctcaagctcatggagtcgctgctggcctcgggcaaccggcctgagtggatgatcctg accgtgttgccggtgctgccgcccgagctgcgcccgctggtgccgctcgacggcggacgc ttcgcgacctcggatctcaacgatctctatcgccgcgtcatcaaccgcaacaaccgcctg aagcgcctgctcgatctgatcgcgcccgacatcatcgtgcgcaacgagaagcgcatgctc caggaggcggtcgacgcgctgctcgacaacgggcgtcgcgggcgtgcgatcacgggcacc aacaagcgtccgctcaagtcgctcgccgacatgatcaagggcaagcagggtcgctttcgt cagaacctgctcggtaagcgtgtcgactactcgggccgttcggtcatcgtggtcggtccg acgctcaagctccatcagtgcggtctgcccaagcgcatggccctggagctgttcaagccc ttcatcttcagcaagctccagttccgcgggctggcggccaccatcaaggcggccaagaag atggtcgagcgcggcacgcccgaggtctgggacatcctcgaagaggtgatccgcgagcat ccggtgatgctcaaccgtgccccgaccctgcaccgtctgggcatccaggcgttcgagccg gtgctgatcgagggcaaggcgatccagctccatccgctggtctgtaccgccttcaacgcc gacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctggaggcgcagttggaa gcgcgcgccctgatgatggcctccaacaacattctgtcgcccgccaacggcgaaccgatc atcgtgccgtcgcaggacgtggtgctgggtctctattacatgacccgcgagcgcatcggc gccaagggtgagggcggtctgttcgtcgatatcgacgaagcgcgtcgtgcctatgagacc ggacacgccgatctgcacgcgcgctgccgggtgcggatccgtgaggtcatcaagcacaag gacggcagcctgaccgagcgcaccagtatcaaggagacgaccgtcggacgcgcgatggtg ttcgccatcgtgcccgagggtctgcccttcgagctggtcgaccgtccgctgggcaagaag cagatctcgatgctgatcaacacctgctatcgccgcctgggactcaaggacaccgtagtc ttcgccgaccagatcatgtatctgggcttccgcatggccacgcgcgccggcatttccatt ggtctggacgacatggaggtgccgcgcgacgaccgggacgccaagatggacaagggcgcg ctgctcgcggcggccgaactcgaggtccaggagatccagcagcagtacgcctcgggtctg gtgacgaacggcgagcgctacaacaaggtcgtcgacatctggtcgcgcaccaacgatcag gtcgccaaggcgatgatgtccaagctgggtacggatctggccaagaccgatcccggcttc gaggccgagcgtctggtcggcgagtaccgtcaggcggcgctgtcggcggtcgagcctgag ggctatgaggcgctgcgggcgattttcgccgagtggcagggcgagctgcgttcggcggct cgggcgctggcgcgcgaggaactgagcctggaggcgttcaacgcccgtttcgacgagctg accgcgcgctaccgtcccgaggtcgtgaccaagctcgatcccgagcggatcaaggcgtcc gaggggcgtgagcgtctggcgatcgggctcaaggacgcgccgacgcgcctggtcgaggag cgcaagcaggactcgttcaactccatctacatgatggccaactccggcgcccgcggctcg gcggctcagatccgtcagctcgccgggatgcgcggcctgatggccaagccggacggctcc atcatcgagacgccgatcaccgcgaacttccgcgagggtctgaacgtcatccagtacttc atctcgacccacggcgcgcgtaagggtctggccgataccgcgctcaagaccgcgaactcg gggtatctgacccggcgtctggtcgacgtggcgcaggacatggtggtgctcgaagaggac tgcggcaccgatcaggggctgctcatggcgcccatcatcgagggcggcgacgtggtcgag ccgctgcgcgagcgtatcctcgggcgcgtggcggcggtcgatgtctatcgtccgggcgtc gacaacccggaactgatctgcaaggccggcaccctgctcgacgagtcctgggtcgagcgc ttcgaggaggtcggtatcgaccaggtgcgggtgcgttcgcccatcacctgtgagtcgcga ctcggcgtctgcgcccagtgctacggacgcgatctggcgcgcggtcatcgcgtcaacata ggcgaggcggtcggtgtcatcgccgctcagtcgatcggcgagccgggcacccagctcacc atgcggaccttccacatcggcggtgcggcctcgcgtgcggcggccgtcagcagcatcgag atcaagaacggcggctcggcgcgtctgcacaacatcaagaccgtgcagcatcactcgggc aacctggtcgccgtctcgcgttcgggcgagctgaccgtggtcgacgagcgcggcatggag aaggagcgctacaaggtgccctatggggcgaccctgcgtgtcggcgacggcgacacggtc aagccgggcgacgtggtcgcgacctgggatccgcacacccaccccgtggtcaccgaggtg gccggtcgactggagttcgaggacttcatcgagggcgtgaccgtacaggcccagaccgac gacgtgacgggtctgagttcgctggtggtcatcgatcccaagcagcgtccggcggcgggc aaggatctgcgcccgatggtcaagctgctcgacgaggacggcaacgagctcaacatcgcg ggcacggatctgccggcgcgctatgccctgtcctcgggcgccatcgtcagcgtggccaac ggcgccaacgtcggcgtgggcgacatcctggcgcgtatcccgcaggagtcctccaagacc cgcgacatcaccggcggtctgccgcgcgtcgcggatctgttcgaggcgcgcaagcccaag gaaccggcgctgctcgccgaggccagcggcaccatcagcttcggcaaggacaccaagggc aagcagcgtctgatcatcaccaaggacgacggcgaaacggtcgaggagctgatcccgaag tggcgtcacgtcaacgtcttcgagggcgagcgcgtcgaacgcggcgaggtgatcgccgac ggcgagctggcctcgcacgacatcctgcgtctgaagggcgtcacggcgctggccgaatat ctggtcaaggagatccaggacgtctaccgcctgcagggcgtgaagatcaacgacaagcac atcgaggtcatcgtccgtcagatgttgcgcaaggttgaggtcacggcccccggcgacacc cgactgctgcgcggcgagcaggtcgaacatgcgttgctgatcgacgagaacaagcgcgtc atggccgagggcaagcagccggcgctgttcgagccgctgctcctgggcatcaccaaggcg tcgctggccaccgagtccttcatctcggcggcctcgttccaggagaccacgcgcgtgctg accgaagcagcggtgcgcggttcgaccgaccggctcgtgggtctgaaggagaacgtcatc gtcggtcgactcatcccggccggtacggggctgtcctaccatcaggaacggcgccgtcag cgggtgctcgactcgggcaaggtcgagatggccaccgaggatccggaacaggcgctcaat actccggaagccgctgagtag

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