Allochromatium tepidum: Atep_15600
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Entry
Atep_15600 CDS
T07447
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
atep
Allochromatium tepidum
Pathway
atep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Atep_15600 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atep03019
]
Atep_15600 (recQ)
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_15600 (recQ)
Enzymes [BR:
atep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Atep_15600 (recQ)
Messenger RNA biogenesis [BR:
atep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Atep_15600 (recQ)
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Atep_15600 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
DNA_pol_A_exoN
BTRD1
ResIII
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
BCU06883
UniProt:
A0ABN6GB38
LinkDB
All DBs
Position
1652863..1654731
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AA seq
622 aa
AA seq
DB search
MAMGESAQEILSRVFGYDRFRGAQAEIIEHVISGGDALVLMPTGGGKSLCYQIPALIRPG
TAIVVSPLIALMQDQVEALRQLGVHAAFLNSSLDLDEARAVERALRNGSLDLLYVAPERL
LTERCLSLLDSIEIALFAIDEAHCVSQWGHDFRPEYIQLECLQKRWPQVPRIALTATADA
PTRNEIVARLRLESARRFVSSFDRPNIRYRIVEKTNPRRQLLDFLRREHPESAGIVYCLS
RRRVEETALHLQERGFRALPYHAGLPAEMRREHQARFLREDGLIMVATIAFGMGIDKPDV
RFVAHLDLPKSPESYYQETGRAGRDGLPADAWMAYGLSDLVTLRRLIEESEAEERFKRIE
MHKLDAMLGLCETTNCRRQVLLNYFGEPLERPCGNCDTCLEPVETWDGTEAARKALSCIY
RTGQRFGSAYLADVLLGKSNDRIRRFGHDRVSTFGIGQSVDGRPMTADQWRSVYRQLVAA
GLVSVDVEGHGSLRLTEAGRPLLRGECGIQLRRDPERKRGGDRTRAPRVAAPSDPEAADL
WQALRAHRFALAQEQDVPAYIIFNDATLRAMLERRPRTLIEMGRLTGVGETKLARFGEGF
LRVIAEHEARQGGRPVSRAVGE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggtgaatcagcacaagagatcctgagccgcgtcttcggctacgaccgcttt
cgcggcgcccaggccgagatcatcgagcatgtgatttccggcggggatgccctggtgctg
atgcccaccggcggcggcaagtcgctctgctatcagatcccggccctgatccggcccgga
accgcgatcgtggtctcgcccctgatcgcgctcatgcaggatcaggtcgaggcgctgcgt
cagctcggtgtgcacgcggccttcctgaactcctcactcgatctcgacgaggcgcgggcc
gtcgagcgcgcgttgcgcaacgggtcgctggatctgctctatgtcgcccccgagcgcctg
ctgaccgagcgctgtctgtccctgctggactcgatcgagatcgcgctcttcgccatcgac
gaggcgcactgcgtctcgcaatggggccacgacttccggcccgaatacatccagctcgag
tgcttgcagaaacgctggccccaggtgccgcgcatcgcgctcaccgccaccgccgacgct
ccgacccgcaacgagatcgtcgcccggctgcggctggagtcggcgcgccgattcgtctcc
agcttcgaccggcccaacatccgctatcgcatcgtcgagaagaccaatccgcgccggcaa
ctgctcgacttcctgcgtcgcgagcatccggagagcgccggtatcgtttactgtctctcg
cgccgccgggtcgaggagacggcgctccatctccaggaacggggtttccgggcgctgccc
tatcacgccggtctgcccgccgagatgcgccgcgagcatcaggcccgcttcctgcgcgag
gacgggctgatcatggtcgccaccatcgccttcggcatgggcatcgacaagccggacgtg
cgcttcgtcgcccatctggatctgcccaagagtccggagtcctattatcaggagaccgga
cgcgccggacgcgacggtctgccggccgatgcctggatggcctatggcctgagcgacctg
gtgaccttgcgccgtctgatcgaggagtccgaggccgaggagcgcttcaagcgcatcgag
atgcacaagctcgacgccatgctcgggctgtgcgagacgaccaactgccgccgtcaggtg
ctgctgaactatttcggcgagcctctggaacgcccctgcggcaactgcgacacctgtctg
gagccggtcgagacctgggatggtacggaagccgcacgcaaggcactgtcctgcatctat
cgcaccggacagcgcttcggcagcgcctatctggccgatgtgctgctcggcaagtccaac
gaccgtatccgtcgcttcggtcatgatcgggtcagcaccttcggtatcggtcagagcgtc
gacggacgtccgatgacggccgatcagtggcgttcggtctatcgccaactggtggccgcc
gggctggtctcggtggacgtcgaggggcatggctcgctgcggctgaccgaggccggtcgc
ccgctgctgcgcggtgagtgcggcatccaactgaggcgcgatccggaacgcaagcgtgga
ggtgaccggacgcgcgcgccccgcgtcgccgcgccgagcgatcccgaggccgccgatctc
tggcaggcgctgcgcgcgcatcgcttcgcgctggcccaggagcaggacgtgccggcctac
atcatctttaatgacgcgaccctgcgcgcgatgctggagcggcgaccgcgcacgctcatc
gagatggggcggctcacgggcgtcggcgagaccaagctggcgcggttcggggaggggttt
ctgcgtgtgatcgccgagcatgaggcccgtcagggcggccggccggtgtcgcgagctgtg
ggtgagtga
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