KEGG   Allochromatium tepidum: Atep_17060
Entry
Atep_17060        CDS       T07447                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
atep  Allochromatium tepidum
Pathway
atep03030  DNA replication
atep03410  Base excision repair
atep03420  Nucleotide excision repair
atep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:atep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Atep_17060 (polA)
   03410 Base excision repair
    Atep_17060 (polA)
   03420 Nucleotide excision repair
    Atep_17060 (polA)
   03440 Homologous recombination
    Atep_17060 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atep03032]
    Atep_17060 (polA)
   03400 DNA repair and recombination proteins [BR:atep03400]
    Atep_17060 (polA)
Enzymes [BR:atep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Atep_17060 (polA)
DNA replication proteins [BR:atep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Atep_17060 (polA)
DNA repair and recombination proteins [BR:atep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Atep_17060 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Atep_17060 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BCU07029
UniProt: A0ABM7QMA6
LinkDB
Position
complement(1798086..1800821)
AA seq 911 aa
MPPQYPLILVDASGYLFRAYHALPKLTNSLGEPTGALVGVLNMLRKLIEDHRPEYIGVVF
DAGGRGFRHDLYPDYKANRPAMPEDLRDQIEPLLAIIRAMGLPLLVVPGVEADDVIGTLA
TQAAAAGLPTLISTGDKDLAQLVGEHVTLINTMTGLVLDPDGVREKFGVPPERIVDYLAL
MGDSVDNVPGVPKCGPKTAVKWIAEYGDLDGVMAQADTVKGKIGESLRAVLDRLPLARDL
ATIKRDVALDFGPTDLRPTPPDVETLRNWYERLESRRLPATLDGVGVAGAPTAARSHEAE
HSTESKAGAEPQYELILTEAALDDWLSRLRTAELFAFDTETTALDAMQAELVGVSFALEP
GHAAYVPLAHVYPGAPEQLDRDRVLARLKPLLEDPDRAKVGQNLKYDMSVLARYDIQLRG
IAHDTLLASYVLDSTARHDLDSLAKRFLDHDTIRFEDVVGKGAKQIGFDQVPLEQAGPYA
AEDAEVTLRLHRVFQPRLAAVPTLERLYREIEMPLVPVLSRLERAGVRIDSAQLATQSAE
LARKILELEESAYRVAGRRFNLGSPKQIGAILFDELGLPVVAKTPKGAPSTSEDVLERLA
ADGHELPRIILDHRGLSKLRSTYTDKLPRMVDPDTGRVHTSYHQAVTATGRLSSSDPNLQ
NIPIRTEEGRRIRRAFVAAPGHRLLAADYSQIELRIMAHLSGDERLLAAFAGGQDIHRAT
AAEILGLAPEDVTSEQRRSAKAINFGLIYGMSAFGLARQLGIERGAAQEYVDRYFERYPG
VRDFMDRTRRQAREDGYVETLFGRRLHLPEIGHGNQARRAAAERTAINAPMQGTAADIIK
RAMIAVDAWIQAERPAVRLIMQVHDELVLEVAESAIEETRVRVREAMEAAAELAVPLVVD
IGEGANWDDAH
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgcccccccagtatcccctaatcctcgtcgacgcctccggctatctgttccgggcctat
cacgccctgcccaagctgaccaactcgctgggcgagccgaccggcgccctggtcggcgtg
ctcaacatgctgcgcaagctcatcgaggatcatcggcccgaatacatcggcgtggtcttc
gatgcgggcgggcgcggtttccgtcacgacctctatcccgactacaaggccaatcggccg
gcgatgccggaggatctgcgcgaccagatcgagccgctgctggcgatcatccgcgccatg
gggctgccgttgctggtcgtgcctggggtcgaggccgacgacgtgatcggcaccctggcc
acgcaagcggcggcggcgggtctgccgaccctgatctcgaccggggacaaggatctggcg
caactggtcggcgagcatgtgaccctgatcaacaccatgaccggcctagtactcgatccg
gatggggtgcgcgagaagttcggcgtgccgcccgagcgcatcgtcgactatctggccctg
atgggcgacagcgtggacaacgtccccggcgtgcccaagtgcggacccaagacggcggtc
aagtggatcgcggaatatggcgatctcgatggggtcatggcccaggccgacacggtcaag
ggcaagatcggcgagtcgctgcgcgccgttctcgatcggctgccgctggcgcgcgacctc
gccaccatcaagcgtgatgtcgcgctcgatttcgggccgaccgatctgcgccccactccg
ccggacgtcgagacgctgcgcaactggtacgagcgactggaatcgcgccgtctgccggcc
acactcgatggtgtcggcgtcgccggcgcgccgaccgctgcacgctcgcacgaggctgag
cactcgacggagtccaaggccggcgccgaaccccagtacgagctgatactgaccgaagcg
gctctggatgactggctgagtcgcctgcgaacggcggaactcttcgcttttgataccgag
accaccgcgctcgacgccatgcaggccgagctggtcggcgtctcgttcgcgctcgaaccg
gggcacgcggcctatgtcccgctcgcgcatgtctatcctggcgcacccgagcagctcgac
cgcgaccgcgtcctggcccgtctgaaaccgctgctggaagaccccgaccgcgccaaggtc
ggccagaacctcaagtacgacatgagcgtgctcgcccgctacgacatccagttgcgcggc
atcgcccacgacacattgctcgcaagctatgtgctcgacagcaccgcgcgccacgacctg
gactcgctggccaagcgctttctcgaccacgacaccatccgcttcgaggacgtcgtcggc
aagggcgccaagcagatcgggttcgatcaggtgccgctggaacaggccggaccctatgcc
gccgaggatgccgaggtcacgctgcgcctgcaccgggtctttcagccgcgtctggccgcc
gtgcccacgctcgaacgcctctatcgcgagatcgagatgccgctggtgcccgtgctctcg
cgtctggaacgcgccggagtgcggatcgacagcgcccagctcgccacccagagcgccgaa
ctggcccgcaaaatcctcgaactggaggaatccgcctaccgggtcgcgggccgacgcttc
aatctcggttcgcccaagcagatcggcgccatcttattcgacgagctgggtctgccggtg
gtcgccaagacgcccaagggcgcaccctcgacctccgaggacgtcctcgaacggctggcc
gccgacggtcacgagctgcctcggatcatcctcgaccatcgcggactgtccaagctcagg
tcgacctataccgacaagctgccgcgcatggtcgaccccgacaccgggcgcgtccacacc
tcctatcatcaggcggtcacggccaccggacggctgtcgtcgagcgatcccaacctccag
aacatcccgatccgcactgaggaaggccgacgcatccgccgcgccttcgtcgccgcaccc
ggtcatcgtctgctcgccgccgactattcgcagatcgaactgcggatcatggcccatctc
tcgggcgacgaacgcctgctcgccgccttcgccggcggtcaggacatccatcgcgccacc
gccgccgagatcctgggactggcgcctgaggatgtcaccagcgaacagcgccgctcggcc
aaggccatcaacttcgggctcatctacggcatgtcggcgttcggactcgcccgtcagctc
ggcatcgaacgcggcgcagcccaggagtacgtcgaccgctatttcgagcgctatccgggc
gtgcgcgacttcatggaccgcacccgccggcaggcgcgcgaggacggctatgtcgagacg
ctcttcggtcgccggctgcacctgcccgagatcggccacggcaaccaggcccgacgcgcc
gccgccgaacgcaccgccatcaatgcaccgatgcagggcacggccgccgacatcatcaag
cgcgccatgatcgccgtcgacgcctggatccaagccgaacgacctgcggtgcggctgatc
atgcaggtccacgacgagctggtgctggaggtcgccgagtcggcgatcgaggaaacccgg
gtgcgggtacgggaggcgatggaggccgccgccgaactggccgtgccgctggtggtggac
atcggtgagggcgcgaactgggacgatgcgcactga

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