Allochromatium tepidum: Atep_18550
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Entry
Atep_18550 CDS
T07447
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
atep
Allochromatium tepidum
Pathway
atep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Atep_18550 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_18550 (uvrB)
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Atep_18550 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Atep_18550 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_16
AAA_30
UB2H
AAA_33
TPGS1_C
Ish1
Motif
Other DBs
NCBI-ProteinID:
BCU07178
UniProt:
A0ABN6GB90
LinkDB
All DBs
Position
1963876..1965894
Genome browser
AA seq
672 aa
AA seq
DB search
MSNPSSPAFELVSPFAPAGDQPEAIRRLVAGLNDGEAGLTLLGVTGSGKTFTIANVIAQV
QRPALILAPNKTLAAQLYGEMREFFPRNAVEYFVSYYDYYQPEAYVPATDTYIEKDAAIN
EHIEQMRLSATKALLERRDVIIVATVSSIYGLGDPEAYLKMVLILKRGERIDQRAILRRL
AELQYTRNEIELSRGAYRVRGDVIDIHPAESDDEALRIALFDDEIETLSLFDPLTGEVRR
QVSRYTVFPKTHYATPRETILKAIDLIKPELKERLDWLRANDKLVEAQRLEQRTLFDLEM
MLEVGYCQGIENYSRYLSGRQPGEPPPTLYDYLPPDAILVIDESHVTVPQLGGMYRGDRS
RKENLVEYGFRLPSALDNRPLQFEEFQSRQPQTIYVSATPRAFEIEHSGAVIEQVVRPTG
LVDPEVEVRPALSQVDDLLSEIGPRVAADERVLVTTLTKRMAEDLTEYLDEHGVKVRYLH
SDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTDSLIQ
TIGRAARNANGKAILYADRITGSMQRAIEESERRRAKQIAANAAQGITPQTIRKAVADIL
EAHTPGAPMKARDYAKVAEQVAEYGRLTPQQMAKRLKTLEKQMYQHAKNLEFEEAAAIRD
QIRELQTRGLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccctccagtcccgccttcgaactcgtcagccccttcgccccggccggcgac
cagcccgaggccatccgccgtctggtcgcgggtctgaacgacggcgaggccggtctgacc
ctgctcggcgtgaccggctcgggcaagaccttcaccatcgccaacgtcatcgcccaggtg
cagcgtccggccctgatcctcgcgcccaacaagacgctggccgcccagctctatggcgag
atgcgcgagttcttcccacgcaacgctgtggagtatttcgtctcctattacgactactac
cagcccgaggcctatgtcccggcgaccgacacctatatcgagaaggacgccgcgatcaac
gagcacatcgaacagatgcgcctctcagcaacgaaagcgctgctggaacggcgcgacgtc
atcatcgtcgccaccgtctcgtccatctatggtctgggcgatcccgaggcctatctgaag
atggtgctgatcctcaagcgcggcgagcgcatcgaccagcgcgccatcctgcgccggctc
gccgagctgcaatacacccgcaacgagatcgagctgtcgcgcggcgcctatcgcgtgcgc
ggcgacgtgatcgacatccacccggccgagtccgacgacgaggcgctgcgcatcgccctg
ttcgacgacgagatcgagacgctgtcgctgttcgatccgctcaccggcgaggtgcggcgt
caggtctcgcgctacaccgtcttccccaagacccactatgccaccccgcgcgagactatt
ctgaaggccatcgatctgatcaaacccgaactcaaggagcgactcgactggctgcgcgcc
aacgacaagctggtcgaggcccagcggctcgaacagcgcacattgttcgatctggagatg
atgctggaggtcggctactgccagggcatcgagaactacagccgctatctctccgggcgt
cagccgggcgagccgccgccgacgctgtacgactatctgccgccggatgcgattttggtt
atcgacgagagtcatgtcaccgtcccccagctcggcggcatgtatcgcggcgaccgctcg
cgcaaggagaatctggtcgaatacggcttccggctgccctcggcgctcgacaaccgcccg
ctccagttcgaggagtttcagtcacgccagccgcagaccatctatgtctcggccaccccg
cgcgccttcgagatcgagcactcgggcgcggtcatcgaacaggtggtacgcccgaccgga
ctggtcgatcccgaggtcgaggtgcgtccggcgctcagtcaggtcgacgatctgctgtcc
gagatcggcccgcgcgtggccgccgacgagcgggtgctggtgacgaccctgaccaagcgc
atggccgaggatctgaccgaatatctcgacgaacatggcgtcaaggtgcgctatctgcat
tcggacatcgataccgtcgagcgggtcgagatcatccgcgatctgcggctcggcgccttc
gacgtgctggtcggcatcaatctgctgcgcgaggggctggacatgcccgaggtgtcgctg
gtggcgatcctggatgccgacaaggagggctttctgcgctcgaccgattcgctgatccag
accataggccgcgccgcgcgcaacgccaacggcaaggcgatcctctatgccgaccgcatc
accggctcgatgcagcgcgcgatcgaggagagcgagcgacgccgcgccaagcagatcgcg
gccaacgcggctcagggcatcacgccccagaccatccgcaaggcggtcgccgatatcctg
gaggcccatacgcccggcgcgccgatgaaggcccgcgactatgccaaggtcgccgagcag
gtggccgagtacggacgcctgacgccccagcaaatggccaagcgcctcaagacgctggaa
aagcagatgtaccagcacgccaagaatctggagttcgaggaagctgccgccatccgcgac
cagattcgcgagttacagacgcgagggctggcggcatga
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