Allochromatium tepidum: Atep_18970
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Entry
Atep_18970 CDS
T07447
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atep03032
]
Atep_18970
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_18970
Enzymes [BR:
atep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Atep_18970
DNA replication proteins [BR:
atep03032
]
Prokaryotic type
DNA Topoisomerases
Atep_18970
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Atep_18970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
Hint
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
BCU07220
UniProt:
A0ABM7QN05
LinkDB
All DBs
Position
complement(2003602..2006769)
Genome browser
AA seq
1055 aa
AA seq
DB search
MPDFAKEVLPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMHEQGNVWN
RAYRKSARVVGDVMGKYHPHGDAAIYDTMVRMAQPFSLRNLLIDGQGNFGCFTGDTAIKL
ADGTEKTFAELAQLTPNEIFYVYAVDKTGKIVIAEGRHARLTRPDAELLELTLDTGDVVR
CTPDHRFMLRDGSYKEAQDLTPDDSLMPGVFEMAYDSIRIPDCDVTPDLYESNRQRNWIP
RLNKAVEYFGDFDALVTAGRHYNHRVVSQRRLTERADTYDITVDHHHNFLLACGVFVHNS
VDGDPPAAMRYTEVRMTRIADTLLDDLDKETVDFVPNYDNTEHEPSVLPARFPNLLVNGS
SGIAVGMATNIPPHNLREVIDACLAIIDNPLVTLDELMEIVPGPDFPTAGLINGVRGIRE
AYRTGRGRCVMRARATTETQKRSGREAIVITEIPYQVNKARLLERIAELVKEKKIEGIAQ
DGLRDESDKDGMRIVIELKRDTHSEVLLNNLYQHTQLQQVFGINMVALVDGQPLTLNLKQ
ILEYFLRHRRDVVTRRTLYELRKARDRAHVLEGYAIALANIDEVIATIKAAANPAEARER
LMERHWPPGAVTGMLERAGADRTRPEELEACFGLSDAGYRLSERQAKAILDLQLHRLTGL
EQDKILKEFEDILETIAALLLILSDPDRLMEVIREELIAVRDQFGDARRTEIQVDQTDLT
LEDLIAPEDMVVTLSHQGYVKAQPISDYQAQKRGGKGKSATAIKEEDFIDRIFVANSHDT
VLCFSSRGRVYWLKVYELPQAGRGARGRPMVNLLPLEAGERITTLLPVRDYEDGFFVFMA
TSAGTVKKTPLKDFSRPLSRGIIAIDLREDELLVGAAITRGEQDLMLFTSAGKAVRFSES
QVRSMGRGAHGVRGVMLQEGQRVIALVAPEDGGTVLSVTENGYGKRTDVDQFPTKGRGTQ
GVIAIDTAERNGAQVGAILVHPGDEIMLIADDGTLIRTSVDQIPVVGRNTKGVKLINLGE
GQRLVFVERIAALEGDKETGEESAEDSETSVADDA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttcgccaaagaagtcctgcccatcaatctcgaagacgagatgcgtcagtcc
tacctcgattacgccatgagcgtgatcgtgggtcgcgccctgccggatgtccgcgatggc
ctcaagccggtgcaccggcgtgtcctcttctccatgcatgagcagggcaacgtctggaac
cgggcctatcgcaaatcggcgcgcgtggtcggcgacgtcatgggtaagtaccacccccac
ggcgacgcggccatctacgacaccatggtgcgcatggcccagccgttctcgctacgcaat
ctgctcatcgacggtcagggcaacttcggttgcttcaccggcgatacggccatcaaactg
gccgacggcaccgagaagacgttcgccgagttggcgcaactcacgcccaacgaaatcttc
tatgtctatgcagtcgacaagaccggcaagatcgtcatcgccgaagggcgtcatgcgcgc
ctgacccgccccgatgccgagctgctggaactcacgctcgacaccggtgatgtcgtccgc
tgcacgcccgatcatcgcttcatgctgcgcgacggctcctacaaggaagcgcaggacttg
acgccggacgacagcctcatgcctggggtcttcgaaatggcttacgacagcattcgtatc
cctgactgcgatgttactcccgatctgtatgaatcgaatcgtcagcggaactggattccg
cgcctgaacaaggccgtcgagtatttcggcgactttgatgcgctcgttacggcgggcagg
cattataaccatcgggttgtcagtcaacgtcgactcaccgagcgcgcagacacctacgac
atcacggtcgaccatcatcacaatttcctgctcgcgtgcggtgtcttcgtccataattcg
gtcgatggcgatccgccggcggccatgcgttacaccgaagtgcgcatgacgcgcatcgcc
gataccctgctcgacgatctggacaaggaaacggtcgatttcgtcccgaactacgacaac
accgagcacgaaccctcggtcctgccggcgcgttttccgaatctgctggtcaacggctcc
tcgggcatcgccgtcggcatggcgaccaacatcccgccgcacaatctgcgcgaggtcatc
gacgcctgtctggcgatcatcgacaatccgctggtgacgctcgacgagctgatggagatc
gtgcccggaccggacttcccgaccgccggtctcatcaatggggtgcgcggcatccgcgaa
gcctaccgcaccgggcgcggtcgctgtgtgatgcgcgcgcgcgccacgaccgagacccag
aagcgtagcggacgcgaggcgatcgtcatcaccgagatcccttatcaggtcaacaaggcg
cgcctgctggagcgcatcgccgagctggtcaaggagaagaagatcgagggtatcgcccag
gacggtctgcgcgacgagtccgacaaggacgggatgcgcatcgtcatcgaactcaagcgc
gacacccactccgaggtgctgctcaacaatctctatcagcacacccagctccagcaggtg
ttcggcatcaacatggtcgcgctggtcgacggccagccgctgacgctcaacctcaagcag
atcctcgaatacttcctgcgccaccgccgcgacgtggtcacgcgccgcaccctctacgaa
ctgcgcaaggcacgcgaccgggcgcatgtgctggaaggctatgccatcgcgctcgccaac
atcgacgaggtgatcgccaccatcaaggccgccgccaatcccgccgaggcccgcgagcgg
ctgatggaacgccactggccgcccggcgccgtgaccgggatgctggagcgcgccggggcc
gaccgcacccgcccggaagaactcgaagcctgcttcggtctcagcgacgccggctatcgg
ctcagcgagcgtcaggccaaggcgatcctggatctgcaactgcatcgcctgaccgggctg
gagcaggacaagatcctcaaggaattcgaggacatcctggagaccatcgccgcgctgctc
ttgatcctctccgatccggatcggctgatggaggtcatccgcgaggagctgatcgccgtg
cgcgaccagttcggcgacgcgcgtcgcaccgagatccaggtcgatcaaacggatctgacc
ctggaggatctgatcgcgcccgaggacatggtcgtcacgctttcgcatcagggctacgtc
aaggcccagccgatcagcgactatcaggcccagaagcgcggcggcaagggcaagagcgcg
accgcgatcaaggaagaggacttcatcgaccgcatcttcgtcgccaactcgcacgacacc
gtgctttgcttctccagccgtggacgggtctactggctcaaggtctacgagctgccccag
gccggacgcggcgcacgcggacggcccatggtcaacctgctgccgctggaggcgggcgag
cgcatcaccacgttgctgccggtgcgcgactacgaggacggcttcttcgtgttcatggcc
accagcgccggtacggtcaagaagaccccgctcaaggacttctcacgtccactgtcgcgc
ggcatcatcgccatcgacctgcgcgaggacgagctgctggtcggcgcggccatcacgcgc
ggcgagcaggatctgatgctgttcacctcggcgggcaaggcggtgcggttctccgagagt
caggtgcgttcgatggggcgcggggcgcatggcgtgcgcggcgtgatgctccaggaggga
cagcgggtgatcgccctggtcgcgcccgaggacggcggcaccgtgctcagcgtcaccgag
aacggctacggtaagcgcaccgacgtggatcagttcccgaccaaggggcgcggcacccag
ggcgtgatcgccatcgacaccgccgagcgcaacggcgcccaggtcggcgcgatcctggtc
catccgggcgacgagatcatgctgatcgccgacgacggcaccctgatccgcacctcggtc
gatcagatcccggtggtcgggcgcaataccaagggggtcaaattgatcaatctcggcgaa
ggtcagcgactggtcttcgtcgagcgcatcgccgccctggaaggcgacaaggagacgggc
gaggagtccgccgaggacagcgagacgtccgtggcggatgatgcctag
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integrated database retrieval system
