Allochromatium tepidum: Atep_20080
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Entry
Atep_20080 CDS
T07447
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atep
Allochromatium tepidum
Pathway
atep00260
Glycine, serine and threonine metabolism
atep00460
Cyanoamino acid metabolism
atep00630
Glyoxylate and dicarboxylate metabolism
atep00670
One carbon pool by folate
atep00680
Methane metabolism
atep01100
Metabolic pathways
atep01110
Biosynthesis of secondary metabolites
atep01120
Microbial metabolism in diverse environments
atep01200
Carbon metabolism
atep01230
Biosynthesis of amino acids
atep01240
Biosynthesis of cofactors
atep04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Atep_20080 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Atep_20080 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Atep_20080 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Atep_20080 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Atep_20080 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Atep_20080 (glyA)
Enzymes [BR:
atep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Atep_20080 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
OKR_DC_1
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BCU07331
LinkDB
All DBs
Position
complement(2136293..2137549)
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AA seq
418 aa
AA seq
DB search
MFEKTQQISDYDPELWAAIQDEERRQEEHVELIASENYTSPRVMQAQGSVLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRAKQLFGADYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGAKPNFSGKIYNAVQYGLNPETGEIDYAEVERLAHEHRPRMIVAGFSAYSR
VVDWQRFRDIADSVGAYLLVDMAHVAGLIAAGLYPSPVQIADVTTTTTHKTLRGPRGGLI
LAKSNPEIEKKLNSLVFPGTQGGPLMHVIAAKAVAFKEALEPGFKTYQAQVLANARAMAE
VFIARGYDVVSGGTDDHLFLVSFIRQGLTGKDVDAWLGAANITVNKNAVPNDPQSPFVTS
GIRIGTPAITTRGFGTEEARELAGWMCDLIDARGEPAVIEAVKARVLDLCRRFPVYGH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaagacccaacagatcagcgattacgacccggaactctgggcggccatccag
gacgaggagcgtcgacaggaagagcatgtcgagctcatcgcctccgagaactataccagt
ccgcgcgtcatgcaggcgcagggcagcgtgctgaccaacaagtatgccgagggctatccg
ggcaaacgttactacggcggctgtgagcatgtcgacgtcgccgagcagttggccatcgac
cgtgccaagcagctcttcggcgccgattatgccaacgtccagccgcactccggctcccag
gccaatgccgccgtctacatggccctgtgcgaaccgggcgacaccgtgctcggcatgagc
ctggcccacggcggacatctgacgcatggggccaagcccaacttctcgggcaagatctac
aacgccgtgcaatatggcctgaatcccgagaccggcgagatcgattacgccgaggtcgag
cgtctggcccatgagcacaggccgcggatgatcgtcgccggcttctcggcctattcgcgc
gtcgtcgactggcagcgtttccgcgacatcgccgacagtgtgggcgcttatctactggtc
gacatggcgcatgtggccggtctgatcgcggccggactctatccgagtccggtgcaaatc
gccgacgtcaccaccaccacgacccacaagaccctacgcggcccgcgcggcggtctgatc
ctggccaagtccaaccccgagatcgagaagaagctcaactcgctggttttccccggcact
cagggcggtccgttgatgcacgtcatcgccgccaaggcggtggccttcaaagaagcgctg
gagccgggcttcaagacctatcaggcccaggtgctcgccaacgcccgcgccatggccgag
gtcttcatcgcgcgcggctacgacgtcgtctccggcggcaccgacgatcatctgttcctg
gtcagcttcatccgccaggggctgaccggcaaggacgtcgacgcctggctgggcgcggcc
aacatcacggtcaacaagaatgccgtccccaatgatccgcaatcgcccttcgtcaccagc
ggcatccgcatcggtaccccggccatcaccacccgtggcttcggcactgaggaagcgcgt
gagctggccggctggatgtgcgatctgatcgacgcgcgcggcgaaccggcggtcatcgaa
gccgtcaaggccagggtgctggatctctgccggcgtttcccggtctacggccattga
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