Allochromatium tepidum: Atep_21420
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Entry
Atep_21420 CDS
T07447
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atep03032
]
Atep_21420
03036 Chromosome and associated proteins [BR:
atep03036
]
Atep_21420
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_21420
DNA replication proteins [BR:
atep03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Atep_21420
Chromosome and associated proteins [BR:
atep03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Atep_21420
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Atep_21420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BCU07465
LinkDB
All DBs
Position
complement(2289389..2289661)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKMAEAADISKAAAGRALDAFTDSIAVALKEGDTVSLIGFGTFSLKERAARTG
RNPQTGATIEIKASKTPSFKAGKALKDAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaactcatcgaaaaaatggccgaggccgccgatatctccaaggctgcg
gccggtcgcgccctggatgccttcaccgattcgattgctgttgcactgaaggaaggagat
actgtatcattgatcgggttcggtaccttttctttgaaagagcgcgcggcccgtaccggt
cgcaacccccagacgggcgctaccatcgaaatcaaggcatcgaaaacgccttcattcaag
gctggtaaagcactcaaagacgcggtacaatag
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