Allochromatium tepidum: Atep_21620
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Entry
Atep_21620 CDS
T07447
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
atep
Allochromatium tepidum
Pathway
atep03030
DNA replication
atep03430
Mismatch repair
atep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atep_21620
03430 Mismatch repair
Atep_21620
03440 Homologous recombination
Atep_21620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atep03032
]
Atep_21620
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_21620
Enzymes [BR:
atep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atep_21620
DNA replication proteins [BR:
atep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atep_21620
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atep_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
RuvB_N
nSTAND3
AAA_29
TIP49
Mg_chelatase
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
BCU07485
LinkDB
All DBs
Position
complement(2313037..2314116)
Genome browser
AA seq
359 aa
AA seq
DB search
MSPTRAESAPSKSALPSPRSFEVPLPWTESIWSRLQASRAADRLAHGLLISGPNGVGKRA
LAHALAQSLLCRTPNAQGLACGQCADCHLLAAGSHPDLIEVGPDPESKSGEIPIDAVRQF
AERESLTPSRAPFKVALIDPADRLNQAAANALLKTLEEPTGHSVLCLIGERIGRLPATIR
SRCLLIPVPIPDEAAALSWLASREPRADWPLRLRLAHGAPLRALAESADDTRLEQRSQCL
NGFLEIARGRGDPVTVAGRWNEIGAGRILDWLAGVMGDLLRLGVCATPPRLDHPDRRDEL
AALAQRLDPAAGHRFLKRILEARALGESNLNQQLLLESLAIDWSRIVRSAHSGTGGSSG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgacgcgcgccgaatccgctccgtcgaaatcggccttgccgtcgccacgatcg
ttcgaggttcccttgccctggacggagtcgatctggtcgcgtctgcaagcttcgcgcgcc
gccgatcggctggcacatgggctgctgatctcggggccgaacggcgtcggcaaacgtgcg
ctggcgcatgcattggcccagtcgctgctgtgccggactccgaacgcccaagggctggcc
tgcggtcagtgtgccgattgtcatctactcgctgccggtagccatccggatctgatcgag
gtcggccccgatccggagagcaaatcgggcgagatccccatcgacgcggtacgacagttc
gccgagcgcgagtccctgaccccgagccgcgcccccttcaaggtcgccctgatcgatccg
gccgacaggctcaatcaggccgccgccaatgcactgctcaagacgttggaagagccgacc
ggacacagcgtcctctgtctgatcggcgagcgcatcggacgcctgccggcgaccatccgc
agtcgctgtctgctgatcccggtgccgattccggacgaggcggcggcgctgagctggttg
gcctcacgcgaaccgcgcgcggactggccgttgcggctgcgtttggcgcatggcgccccg
ttgcgcgccctggccgaaagcgccgacgacacccggctggagcagcgcagtcagtgtctg
aacggattcctggagatcgcgcgcggacgcggcgatccggtcacggtcgccggacgctgg
aacgagatcggcgccgggcgtatcctcgactggctcgccggcgtcatgggcgatctgctg
cggctgggcgtctgcgccacaccgccccggctcgatcacccggatcgacgggacgaactg
gcggcgctggcgcaacggctcgacccggcggcgggacatcgcttcctcaagcgcatcctg
gaagcacgcgccctgggtgagagcaatctcaatcaacagttgctgctggaatccctggcc
atcgactggtcgcggatcgtccggtcggcacacagcgggactggaggatcgagcggatga
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