Allochromatium tepidum: Atep_23900
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Entry
Atep_23900 CDS
T07447
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atep02044
]
Atep_23900
02035 Bacterial motility proteins [BR:
atep02035
]
Atep_23900
Secretion system [BR:
atep02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Atep_23900
Bacterial motility proteins [BR:
atep02035
]
Pilus system
Pilus assembly proteins
Atep_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_2
PQQ_3
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
BCU07713
LinkDB
All DBs
Position
2559619..2563770
Genome browser
AA seq
1383 aa
AA seq
DB search
MLKSRLLIHLAWAINGMLLSLVPVHAALTLPNIPLGVATSAKPMTMITAGKDHKLFYEAY
NDASDINGDGVLDIRFKPSITYYGLFDPNLCYTHNNASDTTGLFSPDSYATNGKCPGKWS
GNWLNYVTTSRIDALRKVLYGGYRDEDTATQTILRRAYIPQDAHSWAKEYTSEAVDGYKI
SDYTPLAQPASGKRHFFGNLTANAGTNCDTLSNCSGLPPLLSVVTNSSKRVWEWASKERP
VLDNTHGGTRTDYTVRVEVCTANFHDGCKQYPNGPNGTYKPIGLLHDYGENDAMLFGLLT
GSYNKNMSGGVLRKVVASFKDEVNPSTGQFTNVNGIVRSFDSLRIRDFNNGRTDKAYRSG
WKTNGPMSEGQFVDWGNPIAEMMYEGLRYFAGKGSATSAFATSGSHDEHVGLPVATWDNP
YSATSAAQAPWCAKANMLVVSDINPSFDSDQLPGSSFGSFSGDVSGMNVTALADTITAHE
PGVTGLHFIGQSGTDYDTAPTAKDVTSLAKIRGLAPEEPTKQGSYYSAAVAYYGKTNDLN
TATGNQTVDSFYVALASPLPRIEFPVGGGKMVTLVPFAKSVGQDGSPYTGFQPTNQIVDF
YVDSIYNLPGAPYDSTVNGGRPYAKFRINYEDVEQGADHDMDAIVEYTITLDATGKVQVD
LNSTYAAGSIIQHMGYVISGTTADGVYLDVRDKDTAEDKDIDYVLDTPNVPGALPLTSSR
TFTPGAAGATLLKDPLWYAAKWGGFVDKNGNNLPDPSYEWDADGNGVPDTYFLVQNPLKL
KESLKRAFENIIERSASAGNVTSNSTSITSTTQVFQSIFNTANWSGDLLAYPITTSGVGA
TPSWKASAQIPALGDRKIFITGSTGSTVLFQWSSLIAADQTTLGNADVVDYLRGERSKEL
QNGGGFRNRAIDNVLGDIVHSSPYYVKDTNTVYVGANDGMLHAFDATTGKELFAYIPSAV
IPKLKDLTQPSYTHAYYVDGDIAVSNLDQTPGKNYLVATLGHGGKGLFALDVTNPTTFSA
SNFLWQYFNPSDNDLGYMLGRPVLAKMNNGSFAVVVGNGYNSNTGKAVLYIFNLATGSLI
TKIDTGVAGDNGLATPGVVDVDGDNDVDVIYAGDLKGNVWKFDVSHSNPNQWKSAFMSGS
TPKPFFVAKDPSNNRQPITAQITSVLNQVSGDPNYGKRFVFFGTGSYFRSGDPADTKIQS
WYGLIDDNAQITSRSDLQARSVLAEGIFSDKQVRTFSDATANDMTDKKGWVLDFTTHPGE
RIVTASRYYKFAQPTLIASSIIPVVDPCVPGGNGYVNAINPFTGARLTQGFFDVNKNNDF
SDDKLNNNLIGGIDLGVGMPSEPTIVGDRLIVGGSRGTIADIRINLGISPLKERISWREI
VTE
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatcaagattattgattcacctagcatgggcaatcaatggaatgctgctgagc
ttggtgccggttcatgctgccctgacattgcctaacatacctttgggggtagccacctct
gccaagcccatgaccatgattacagcgggtaaggatcacaagctgttttacgaagcctac
aacgacgccagcgacatcaatggcgacggggttttggatattcgctttaaacccagtatc
acctattacggcttgttcgaccccaacctttgttacacccataataacgcaagtgacact
acggggcttttttcgcccgattcctatgccaccaatggcaaatgtccgggtaagtggtct
ggcaactggttgaactacgtcaccaccagccgcatcgatgcgctgcgcaaggtgctttat
ggtggctaccgggatgaggacaccgccacgcagaccatcctacgccgcgcctacatcccg
caagacgcccactcctgggccaaggaatataccagcgaagcagtggatggttacaaaatc
agcgattacacccccctggcgcaacccgcatccggcaagcggcacttcttcggcaatctc
acggccaacgccgggaccaactgcgacacgttaagcaattgtagtggcttgccgccgttg
ttgtcggttgtcaccaacagctctaagcgggtgtgggagtgggcatccaaggagcggccg
gtgctggataatacccatggcggcacgcgtaccgattacaccgttcgggtcgaagtgtgt
accgcaaactttcacgacggctgcaaacaatatccaaacggtccaaacggcacgtacaag
ccgattggcctattgcacgactacggcgaaaacgacgccatgctattcggcttgttgacg
ggcagttacaacaaaaacatgtcgggcggcgtgctacgcaaagtggtcgcttcgttcaaa
gacgaagtcaatcccagcacgggtcaatttaccaacgtcaatggcatcgtgcgctcattc
gacagcttgcgcattcgcgatttcaataatggaagaaccgataaagcctaccgttccggc
tggaaaactaatggccccatgagtgaggggcagtttgtcgattggggcaaccccatcgcc
gaaatgatgtacgaaggattgcgctattttgccggcaaaggaagtgcaacgtctgccttt
gcgaccagcggttcccacgatgagcatgtaggtcttcctgtggccacatgggataatccc
tacagcgcaacgagtgccgcccaggccccttggtgcgccaaagcgaacatgttggttgtc
agcgacatcaacccttcgtttgactccgaccagcttccaggcagttctttcggcagcttt
tcaggcgacgtgtcggggatgaacgtcacggctttagctgacaccattaccgcccatgaa
cctggagtgaccgggctgcactttatcggtcaatcgggcacagattatgacacggcacct
acggcaaaggacgtaacctcgttagccaagattcgcgggcttgccccggaagaaccgacc
aaacagggcagctattacagcgcagcggtggcctattatggcaagactaacgacctcaac
actgccacgggcaatcagaccgtcgattcattctatgtggcgctcgcttcccctttgccc
agaattgaatttcccgttggtggagggaaaatggtcactttagtgccatttgcaaagtcg
gtaggtcaggatggaagcccatatactgggtttcaaccaaccaaccaaattgttgatttt
tatgtcgactctatctacaacctgcctggagccccgtacgattccactgtcaatggcggt
cgtccgtatgccaaattccgaatcaactatgaggatgtcgaacagggcgctgaccacgac
atggatgctattgttgaatataccatcacgctcgatgcaacagggaaagtccaagtcgat
ctaaattcaacctatgccgctgggagcatcattcaacacatgggctatgtgatttcaggc
accacggcggatggggtttatcttgatgtgcgtgataaggatacggctgaagataaggac
attgactatgtgttggatacccccaatgttccaggcgctttgccattgaccagctcgcgt
acctttacccccggggcggccggcgctaccttactcaaggatcctttgtggtacgcagcc
aaatggggaggatttgtcgataaaaacggcaacaaccttccggacccttcctatgaatgg
gatgctgatggcaatggcgtgccggatacctattttctggttcaaaatccccttaagttg
aaagagtcgctcaaacgcgcctttgaaaatatcatcgagcgcagcgcgagcgcagggaat
gttacctctaacagtacttctattacatcgacgacgcaggtttttcagtccatattcaat
accgccaactggtccggcgatctgctcgcgtatccgatcactacttctggagtcggcgca
acgcccagttggaaggcttccgcgcagattcctgcgctgggggatcgtaagattttcatc
actggctccactggttccaccgtgctcttccagtggtcctctttgattgccgccgatcaa
actacactgggcaatgcggatgtcgtcgactatctgcgcggcgagcgcagcaaggagttg
caaaatggtggagggtttcgcaaccgcgcaatcgataacgtcttgggcgacatcgtccac
tcctcgccctattacgtcaaagacaccaacaccgtgtatgtgggtgccaacgacggcatg
ctgcatgcttttgatgcaacgacgggtaaggagcttttcgcctacattcccagcgcagtg
attcccaaactgaaagacctgacccaacccagttacacccatgcctattacgtggatggc
gacatcgctgtgtcgaacctggatcaaacgcccgggaaaaactatctcgttgctactttg
ggccacggcggcaagggcttgtttgccctcgacgttaccaaccccactacgttctcagca
agcaacttcctgtggcagtacttcaatcccagcgataacgatttgggctatatgctgggt
cggccggtactggccaagatgaacaatggttcgtttgcggtggtcgtgggaaatggctat
aactccaataccggcaaggcggtgctgtatatctttaacctagccacagggagcctgatc
acaaagatcgacaccggcgtcgccggtgataatggtttggcaaccccgggggtggtggat
gtggatggcgacaacgatgtcgatgtcatctacgccggtgacctgaaaggaaacgtgtgg
aaattcgacgtcagccacagcaatcccaaccaatggaagtcggcctttatgtcaggatcg
acccccaagccgttcttcgttgccaaagacccttccaacaaccgccagccgattacggcg
cagatcacttctgtgctaaaccaggtctctggtgatccgaactacggcaagcgcttcgtt
ttcttcggcaccggcagctattttagaagcggcgacccggccgataccaaaatccaaagc
tggtatggactgattgacgataatgcccagattacaagccgcagtgatcttcaggcccgt
tccgttctggccgagggcattttctccgacaaacaggttcgcaccttctctgatgccaca
gcaaacgacatgacggacaaaaaaggctgggtattggatttcactactcacccaggggaa
cgcatcgttacagcttccaggtactacaagtttgcccagccgacgctgattgccagttcg
atcatccccgtggtcgatccttgcgtgccgggcggtaacggctacgtcaacgccatcaac
cccttcaccggtgcgcgccttacacagggcttcttcgacgttaacaaaaacaacgacttc
agcgacgacaaactcaacaataacctcattggcggcatcgatcttggcgtaggtatgccc
agcgaacctaccatcgttggcgatcgtttgatcgtgggaggatccagaggcacgattgcc
gatatccgcatcaaccttgggatttctccactcaaagagcgcatctcctggcgggaaatc
gtaacggagtaa
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