Allochromatium tepidum: Atep_25250
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Entry
Atep_25250 CDS
T07447
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
atep
Allochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atep03021
]
Atep_25250 (rpoH)
Transcription machinery [BR:
atep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Atep_25250 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
KORA
HTH_10
Sua5_C
YdaS_toxin
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BCU07848
LinkDB
All DBs
Position
complement(2713279..2714118)
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AA seq
279 aa
AA seq
DB search
MAKDFSILPTGTIEAYINSAYQIPVLTPEEERSLAVRLRDQNDMEAAKRLVTSHLRFVIR
IARGYLGYGLPLPDLIQEGTVGLMKAVRRFEPDMGVRLVSFAVHWIRAEIHEYILRNWRI
VKVATTKAQRKLFFNLRSSKKRLGWLTKQEVDEVAADLGVKPEVVLQMESRLSNQDLSFD
GLEDDDDDSPAAPSTYLPDVRMEPSRLLEHEDTDRDQRERLYAALEDLDDRSKTILFERW
LSEKKQTLHELAEKFGVSAERIRQIEKNAMKKVRLQIEV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacttctccatactgccgaccggtacgatcgaggcgtacatcaacagtgcc
taccagattcctgttctgactcctgaggaagagcgctcgttggcggtgcgtctacgcgac
cagaacgacatggaggccgccaagcgtctggtgacttcacatctgcgcttcgtgatccgg
atcgcgcgcggttatctgggctatggtctgccgttgcccgatctgatccaggagggcacg
gtcggcttgatgaaggcggtgcgccgcttcgaacccgacatgggcgtgcgtttggtgtcc
ttcgccgtgcactggattcgcgctgagatccacgaatacatcctgcgcaactggcgcatc
gtcaaggtggcgaccaccaaggcacagcgcaaactgttcttcaatctgcgcagttccaag
aagcgtctcggctggctgaccaagcaggaagtcgacgaggtagcagcggatctcggggtc
aagcccgaggtggtgctccagatggaatcgcggctgtccaatcaggatctgtctttcgac
ggactcgaggacgatgacgacgactcgccggccgcgccctcgacctatctgcccgacgtg
cgcatggagccgtcgcggctgctggagcatgaagacacggatcgcgatcagcgtgagcgc
ctctatgccgctctcgaagacttggacgatcggagcaagaccatcctcttcgagcgctgg
ctgtcggaaaagaagcagactctgcatgaactggccgagaagttcggggtttcagccgag
cgtatccgccagatcgagaagaacgccatgaagaaggtgcgtctacagatcgaagtctga
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