Allochromatium tepidum: Atep_27800
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Entry
Atep_27800 CDS
T07447
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
atep
Allochromatium tepidum
Pathway
atep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Atep_27800 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_27800 (recC)
Enzymes [BR:
atep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Atep_27800 (recC)
DNA repair and recombination proteins [BR:
atep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Atep_27800 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCU08103
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All DBs
Position
2978301..2981891
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AA seq
1196 aa
AA seq
DB search
MLTEDLTSVADSDWPTGFMLIQGNRLEELRALLVAWMHRHPLAPLENETILVQSSGIAQW
LKLALAATPDANETEGGLGIAAALDVMLPARFIWRVYRTVLGDLPETSPFDKAPLTWRLY
RLLERLTGEAPLQASDIHCEALAPLRGFLAVDGLEAAPRRRYQLAERLADLFDQYQVYRA
DWLAAWGQGRDILIRHDGKPAALPASQGWQPVLWRALQADVRDEYGPDAPWLLQASRAEV
HRAFLERAGQAEDRTPERLANLRAVGLPRRVIVFGLSSLPRQMLEVLEAIAPVCQVMLFV
LNPCRHYWGDIIEGRDLFRRPYRRRSERKAPTDLDESEWHLHGHPLLAAWGKQGRDYLRL
LDEHDDRAQYESYFQSHSLKIDLFDSPGADCLLHQLQDDILELRPLQERRDRGTVIDPER
DRSLEFIVAHSPQREIEILHDRLLDEFERSARTDRPLQPREVLVMVPDIAVHAPHIQAVF
GRFDPDDRRYIPFRITDQGQRHRNPLVIGLEHLLNLPRARFAVSELLDLLDIPALRTRFG
LDEPDLPRLRLWIAGANVRWGLDAAQRAGLGLPEGLEQNTWRFGLRRLLLGFASGDAGPW
RGVEPHDEVGGLEAALLGPLAQLLERLEAYWQCLTEPRSPAGWVELVGRLLDDFFAESSE
SDGVTLARILLELDAWEADCIRGGLGTEPIALEIVRDSLLARLDRPSLTQRFLGGAVNFA
TLMPMRAIPFRQIWLLGMNDGDYPRRRVPADFDLMANDYRPGDRSRREDDRYLFLEALLS
AREKLVIGWVGRGIRDNSERPPSVLVGQLRDHLAAGWRRPDGDGAGLLAALTSVHPLQPF
GRGYFEPGRAKTLFTYAREWRAVHDGAGATAVSAERLAPWLPETPVDLDQLQGFLRDPIT
ALFDQRLRIKAPGEVVAPPDVETFALDGLGDWQIKDELISRTFEPGLDRSALEQRLHAGI
ARFQAQGRLPNGSLGERLGQTVIAYLPVLHTAWDAALSEWPRRLDRPIPVMVEVNVPAGR
LVLEDVLSDLREGDDGRGQIILQTSGLTKDKHYQWRNTLRAWVRHLAAQLDGEPVTTRLL
TPSGDARLEPVPVDEARERLEALLVVWWEGMQRPLPVALNAGMAWLDKDGPETLEDGTAP
EELKAWNAALQAFDLDHTYNAYVGRCYDSFEALWSGGEFARWAHRLYGGLRKTISR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaagacttgacgagcgttgccgactcagactggccgaccggcttcatgctg
atccagggcaaccggctggaggaactacgtgcgctcctggtcgcctggatgcaccgtcat
ccgctcgcgccgctggagaacgagacgatcctggtgcagagcagcggcatcgcgcagtgg
ctcaagctcgcgctggccgccacacccgatgccaacgagaccgagggcggcctgggtatc
gccgccgcgctcgatgtgatgttgccggcgcgtttcatctggcgcgtctaccgcaccgtg
ctcggcgacctgcccgagacctcgcccttcgacaaggcgcccctgacctggcggctgtat
cgtctgctcgaacgactcacgggtgaggcgccgctccaggcgagcgacatccactgcgag
gcgcttgcaccgctgcgcggctttctggcggtcgatggcctggaagccgccccgcgccgg
cgctatcagctcgccgaacgtctggcggatctgttcgatcaatatcaggtctatcgtgcc
gattggctggcggcctggggccaggggcgcgacattctcatccgccacgacggcaagccg
gccgctctgccggccagtcagggctggcagccggtgctctggcgtgctctgcaagccgac
gtgcgtgacgagtatggcccggacgcgccgtggctgctccaggccagtcgcgccgaggtc
catcgggccttcctggagcgtgccggtcaggcggaggatcgcaccccggagcgcctcgcg
aatctgcgcgcggtcggactgccgcgccgggtcatcgtcttcggtctgtcctcgctgccg
cgtcagatgctggaagtgctggaggccatcgcgcccgtgtgtcaggtgatgctgttcgtg
ctcaatccctgccggcactactggggcgacatcatcgagggtcgcgatctgtttcgccgg
ccctatcggcgccggtcggaacgcaaggcgccgacggatctcgacgagtccgaatggcat
ctgcacggtcatccgctgctcgcggcctggggcaagcagggacgcgactatctgcgcctg
ctcgacgagcacgacgatcgcgcgcaatacgaatcctattttcagtcgcacagtctcaag
atcgacctcttcgactcgccaggcgccgactgtctgctgcaccagttgcaggacgacatc
ctggaactgcgtccgctccaggaacgccgggaccggggaaccgtcatcgaccccgagcgc
gaccgcagtctggagttcatcgtcgcccacagcccgcagcgcgagatcgagatcctgcac
gaccggctgctcgatgagttcgagcgctcggcacgcaccgaccgtccgctccagccgcgc
gaggtgctggtgatggtgcccgacatcgccgtccatgcgccgcacatccaggccgtcttc
gggcggttcgatccggacgatcggcgttacatcccgttccggatcaccgatcagggtcag
cgtcatcgcaacccgctggtcatcggtctggagcatctgctgaatctgccgcgcgcccgc
ttcgccgtcagcgagctgctcgacctgctcgacatcccggccctgcgcacgcgcttcggt
ctcgacgagcctgatctgccgcgcctgcgtctgtggatcgccggggccaatgtgcgctgg
gggctggatgcggcccagcgtgccggcctcgggctgcccgaggggctggagcagaacacc
tggcgtttcggactgcgccggctgctgctgggatttgccagcggtgacgccggaccctgg
cgcggcgtggaaccgcacgacgaggtcggcggactggaggcggcgctcctgggaccattg
gcgcagttgctcgaacggctggaagcctactggcagtgtctgaccgagccgcgttcgccg
gccggctgggtcgaactggtcggcaggctgctggacgacttcttcgctgagtcgagcgag
tccgatggggtcacgctcgcgcgtatcctgctcgaactcgacgcctgggaggccgattgc
atccggggcggtttgggcacggaacccatcgcgctggagatcgtccgcgattcgctcctg
gcccggctcgatcggccgagcctgacacagcgcttcttgggcggggcggtcaacttcgcc
accctgatgccgatgcgcgccattcctttccgccagatctggctgctgggcatgaacgat
ggcgactatccgcgccgacgggtgccggccgacttcgatctcatggcgaacgattatcgg
ccgggagatcgctcgcggcgtgaggacgatcgttatctgtttctcgaagcgttgctgtcg
gcgcgcgagaagctggtcatcggctgggtcgggcgcggcatccgcgacaacagcgagcgt
ccgccctcggtgctggtcggacagttgcgcgatcatctggcggccggctggcgtcggccc
gatggcgacggcgccgggctgctcgccgcgctgaccagcgtgcatccgctccagccgttc
gggcgcggctatttcgaaccggggcgggcgaagacgctcttcacctatgcgcgcgagtgg
cgggcggtgcacgatggcgccggagcgacggcggtcagcgccgagcggctcgcgccctgg
ttgcccgagacgccggtcgatctcgatcagctccagggctttctgcgcgatccgatcacg
gcgttgttcgatcagcgcttgcggatcaaggcgccgggcgaggtcgtcgcgccgcccgat
gtggagaccttcgcgctcgacggtctcggggactggcagatcaaggacgaactgatcagc
cggaccttcgagccggggctggacaggtcggcactggagcagcgtctgcacgccggtatc
gcgcgcttccaggcgcagggacggctgccgaatgggagtctgggcgagcgtctggggcaa
acggtcatcgcctatctgccggtgctccataccgcttgggacgcggccctgagcgaatgg
ccccggaggctcgatcgtccgattccggtcatggtggaggtcaatgtaccggccggtcgg
ctggtgctggaagatgtgttgagcgatctgcgcgagggcgacgatgggcgcggtcagatc
attctgcaaaccagcgggctgaccaaggacaagcattatcagtggcgcaatacactgcgc
gcctgggtgcggcatctggcggctcagctcgatggcgagccggtcacgacccgcctgctg
acgccttcaggcgatgcgcgtctggaacctgtgcccgtcgatgaggcccgcgagcggctc
gaagcgctgctcgtcgtctggtgggaggggatgcagcgaccgctgccggttgcgctcaac
gccggcatggcctggctcgacaaggacggccccgagaccctggaggacggcacggcgccc
gaggaactcaaggcctggaacgcggcccttcaagccttcgacctggatcacacatacaac
gcctatgtcggtcgctgttacgacagcttcgaggcgctttggtccgggggcgagttcgcg
cgctgggcgcatcggctctatggcggtctgcgcaagacgatcagccgttag
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integrated database retrieval system
